Globicephala melas (long-finned pilot whale): 115852069
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Entry
115852069 CDS
T11080
Symbol
NPAS3
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmf03000
]
115852069 (NPAS3)
Transcription factors [BR:
gmf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115852069 (NPAS3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
DUF7510
Motif
Other DBs
NCBI-GeneID:
115852069
NCBI-ProteinID:
XP_060150712
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All DBs
Position
2:112220408..113091405
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AA seq
981 aa
AA seq
DB search
MIRIFPDFSVQVTAAAAGGAAAGVPAGAGMGRAGAAANGTPQNVQGITSYQQRITAQHPL
PNQSECRKIYRYDGIYCESTYQNLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAI
TSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKGIQMWKSELCMRKTPC
EVIGAQRRRSPSALAIEVFEAHLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQV
ELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDAASSASSSSQSETPEPVES
TSPSLLTTDNTLERSFFIRMKSTLTKRGVHIKSSGYKVIHITGRLRLRVSLSHGRTVPSQ
IMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCY
HFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNII
WVNYLLSNPEYKDTPMDIAQLPHLPEKTSESSETSDSESDSKDTSGITEDNENSKSDEKG
NQSENSEDPEPDRKKSGNTCDNDMNCNDDGHSSSNPDSRDSDDSFEHSDFENPKAAEDGG
GFGALGPMQIKVERYVESESDLRLQNCESLSSDSAKDSDSAGEAGAQASSKHQKRKKRRK
RQKGGSASRRRLSSASSPGGLDAGLVEPPRLLSSPNSASVLKIKTEISEPINFDNDSSIW
NYPPNREISRNESPYSMTKPPSSEHFPSPPGGAGGGGLHVAIPDSVLTPPGADGTAAAAA
ARKTQFGTSAPAALAPVASDPLSPPLSASPRDKHPGGGSSGGGSGPGASNSLLYTGDLEA
LQRLQAGNVVLPLVHRVTGTLAATSTAAQRVYTTGTIRYAPAEVTLAMQGNLLPNAHAVN
FVDVNSPGFGLDPKTPMEMLYHHVHRLNMSGPFGGAVSAASLTQMPTGNVFTTAEGLFST
LPFPVYSNGIHAAQTLERKED
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgatccgaatctttccggatttcagcgtgcaggtgacggccgcggcagccggcggggcg
gccgcgggggtgccggccggcgcgggcatggggagggccggcgccgcggccaacggcacc
ccgcagaacgtccagggcatcacctcctaccagcagcgaataactgcccagcatcctctg
cccaaccaatcagaatgtaggaaaatctacagatatgacggaatctactgtgaatctacc
taccagaatttacaagcattgagaaaggagaagtcccgggatgctgctcgctcccgccgg
gggaaagaaaactttgagttctatgaattggccaagttgttgcctcttcctgcagccatc
actagccagcttgacaaggcctccatcattcgacttacaattagctatctgaaaatgaga
gactttgctaaccagggggaccctccatggaacttgcgaatggaaggccctccacctaac
acgtcagtaaaagggatacaaatgtggaaatctgaactctgcatgagaaagacaccatgt
gaagttataggtgcacagcgaaggagaagccccagtgcactggccattgaagtatttgaa
gcacatttgggaagtcacattttgcagtccctggatggctttgtatttgcactaaatcaa
gaaggaaaatttttgtacatttctgaaacagtctccatctacctaggcctctcgcaagtg
gagctgacaggcagcagcgtctttgactatgtccaccccggggaccacgtggagatggca
gagcagctgggcatgaagctcccgcccgggcggggtctcctctcgcagggcaccgctgaa
gatgcagccagctcagcatcttcctcttcccagtcagaaaccccagagccagtggaatca
accagccccagtctgctaaccactgacaacactcttgagcgttcgtttttcatccgaatg
aaatctacgctgaccaaacgtggcgtgcacatcaaatcatcgggatataaggtgattcac
ataacgggccggctacgactaagggtgtcgctgtcccacgggaggaccgtccccagccaa
atcatggggctcgtggttgtggctcatgccttgcctccccctacgatcaatgaagtcaga
attgactgccatatgttcgtcactcgagtaaatatggacctcaatatcatttactgtgaa
aataggattagtgattatatggatctgactcctgtagacattgtagggaaaagatgctac
cacttcatccacgctgaagacgtcgagggcatcaggcacagtcacctggacttgctgaat
aagggccaatgtgtgacaaagtactatcgttggatgcagaagaatggaggatacatttgg
atacagtctagtgccacaatagctattaacgccaagaacgcaaatgagaaaaacatcatc
tgggtgaattatcttctgagcaaccccgaatacaaggacacgccaatggacatcgcacag
cttccccacctgccggagaaaacttcggaatcctcagagacctccgactctgagtcagac
tctaaagacacctcaggtattacagaggacaacgagaactccaagtccgacgagaagggg
aaccagtccgagaacagcgaagacccggagcccgaccgcaagaagtcaggcaacacgtgc
gacaacgacatgaactgcaacgacgacggccacagctccagcaacccggacagccgcgac
agcgacgacagcttcgagcactcggactttgagaaccccaaggcggccgaggacggcggc
ggcttcggcgcgctgggccccatgcagatcaaggtcgagcgctacgtggagagcgagtcg
gacctgcggctgcagaactgcgagtcgctgtcgtcggacagcgccaaggactcggacagc
gcgggcgaggcgggcgcgcaggcctccagcaagcaccagaagcgcaagaagaggcggaaa
cggcagaagggcggcagcgccagccgccggcgcctgtccagcgcgtcgagccccggcggc
ctggacgcgggcctggtggagcccccgcggctgctgtcctcccccaacagtgcctcggtg
ctcaagatcaagacggagatctcggaacccatcaacttcgacaacgacagcagcatctgg
aactacccgcccaaccgggagatctcgcggaacgagtcgccctacagcatgaccaagccc
cccagctccgagcacttcccgtccccgccgggcggcgcaggcggcggggggctgcacgtg
gccatccccgactcggtcctcactccgcccggtgccgacggcactgccgccgccgccgcc
gcccgcaagactcagttcggcacctcggcccccgcggccttggcccccgtcgcctccgac
ccgctgtcgcccccgctctcggcgtccccgcgggacaagcaccctgggggcggaagcagc
ggcggcgggagcggccccggagcgtccaactccttgctgtacactggggacctagaggcg
ctgcagaggttgcaggcgggcaacgtcgtgctgccgctggtgcacagggtgaccgggacg
ctggcggccaccagcacggccgcgcagagggtctacaccacgggcaccatccgctacgcg
ccagccgaggtgaccctggccatgcagggcaacctgctgcccaacgcgcacgctgttaac
ttcgtggacgttaacagcccgggcttcggccttgaccccaagacgcccatggagatgctc
taccaccacgtgcaccggctcaacatgtcgggaccgtttggcggcgccgtgagcgcggcc
agcctgacgcagatgcccaccggcaacgtgttcaccacggccgagggactcttctccacg
ctgcccttccccgtctacagcaacggcatccacgcggcacagactctggagcgcaaggag
gactga
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