KEGG   Globicephala melas (long-finned pilot whale): 115852438
Entry
115852438         CDS       T11080                                 
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform X3
  KO
K05699  actinin alpha 1/4
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf04510  Focal adhesion
gmf04517  IgSF CAM signaling
gmf04518  Integrin signaling
gmf04519  Cadherin signaling
gmf04520  Adherens junction
gmf04530  Tight junction
gmf04670  Leukocyte transendothelial migration
gmf04810  Regulation of actin cytoskeleton
gmf05146  Amoebiasis
gmf05203  Viral carcinogenesis
gmf05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    115852438 (ACTN1)
   04518 Integrin signaling
    115852438 (ACTN1)
   04519 Cadherin signaling
    115852438 (ACTN1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115852438 (ACTN1)
   04520 Adherens junction
    115852438 (ACTN1)
   04530 Tight junction
    115852438 (ACTN1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    115852438 (ACTN1)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    115852438 (ACTN1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    115852438 (ACTN1)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    115852438 (ACTN1)
  09163 Immune disease
   05322 Systemic lupus erythematosus
    115852438 (ACTN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gmf04131]
    115852438 (ACTN1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gmf04812]
    115852438 (ACTN1)
   04147 Exosome [BR:gmf04147]
    115852438 (ACTN1)
Membrane trafficking [BR:gmf04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    115852438 (ACTN1)
Cytoskeleton proteins [BR:gmf04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     115852438 (ACTN1)
Exosome [BR:gmf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   115852438 (ACTN1)
  Exosomal proteins of colorectal cancer cells
   115852438 (ACTN1)
  Exosomal proteins of bladder cancer cells
   115852438 (ACTN1)
SSDB
Motif
Pfam: Spectrin CH EFhand_Ca_insen EF-hand_8 EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_5 XisI
Other DBs
NCBI-GeneID: 115852438
NCBI-ProteinID: XP_030711195
LinkDB
Position
2:complement(144505025..144600217)
AA seq 914 aa
MDHYDSQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR
DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV
KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC
ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT
YVSSFYHAFSGAQKAETAANRICKVLAVNQENERLMEDYEKLASDLLEWIRRTIPWLENR
VPENTMHAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRM
VSDINNAWGCLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLRQK
DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQRIC
DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT
IEEIQGLTTAHEQFKATLPDADKERLAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEI
NGKWDHVRQLVPRRDQALMEEHTRQQHNERLRKQFAAQANVIGPWIQTKMEEIGRISIEM
HGTLEDQLSHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQL
LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY
DIGNDPQKKTGMMDTDDFRACLISMGYNMGEAEFARIMSIVDPNRLGVVTFQAFIDFMSR
ETADTDTADQVMASFKILAGDKNYITVDELRRELPPDQAEYCIARMAPYTGPDAVPGALD
YMSFSTALYGESDL
NT seq 2745 nt   +upstreamnt  +downstreamnt
atggaccattatgattcccagcaaaccaatgactacatgcagcccgaggaggactgggat
cgagacctgctcctggacccagcctgggagaagcagcagagaaagacgtttacagcatgg
tgcaactcccacctccggaaggcagggacgcagatcgagaacatcgaggaggacttccgg
gatggcctgaagctaatgctactgctggaggtcatctcaggtgaacgcttggccaagccg
gagagaggcaaaatgagggtgcacaagatctccaatgtcaacaaggccctggacttcata
gccagcaagggggtcaagctggtgtccataggagctgaagaaatcgtggatgggaatgtg
aaaatgaccctgggcatgatctggaccatcatcctccgctttgccatccaggacatctcc
gtggaagagacttcagcgaaggaagggctgctcttgtggtgtcagagaaagacagcccct
tacaaaaacgtcaacatccagaacttccacataagctggaaggacggcctcggcttctgt
gccttgattcaccgacaccggcctgagctgattgactacgggaagctgcggaaggacgac
ccacttacaaacctgaacacggccttcgatgtggcggagaagtacctggacatccccaag
atgttggatgcagaagacatcgtcggaacagcccgcccggatgagaaagccatcatgact
tacgtgtccagcttctaccacgccttctctggagcccagaaggccgagacagccgccaat
cgcatctgcaaggtgctggccgtcaaccaggagaatgagcgcctcatggaagactacgaa
aagctggccagcgatctgctggagtggatccgccgcaccatcccgtggctggagaaccgg
gtacccgagaacaccatgcacgccatgcagcagaagctggaggacttccgagactaccgg
cgcctgcacaagccgcccaaggtgcaggagaagtgccagctggagatcaacttcaacacg
ctgcagaccaagctgcggctcagcaaccggcccgccttcatgccctccgagggcaggatg
gtctcggacatcaacaacgcatggggttgcctggagcaggcagagaagggctatgaggag
tggctgctgaatgagatccggaggctggagcggctcgaccacctggcagagaaattccgg
cagaaggcctccatccacgaggcctggacggacggcaaagaggccatgctgagacagaag
gattacgagacggccaccctctcggagatcaaggccctgctcaagaagcacgaggccttc
gagagcgacctggccgcccaccaggaccgcgtggagcagatcgccgccattgcgcaggag
ctcaatgagctggactattacgactcacccagtgtcaacgcccggtgccaaaggatctgt
gaccagtgggacaatctgggggccctaacccagaagcggagggaagctctggagcggaca
gaaaaactgctggagaccattgaccagctgtacttggaatatgccaagcgggccgcaccc
ttcaacaactggatggagggggccatggaggacctgcaggacaccttcatcgtgcacact
atcgaggagatccagggactgaccacagcccatgagcagttcaaggccaccctccccgat
gctgacaaggagcgcctggccatcctaggcatccacaacgaggtgtccaagattgtccag
acctaccacgtcaacatggcgggcaccaacccctacacaaccatcacgcctcaggagatc
aacggcaaatgggaccacgtacggcagctggtgcctcggagggaccaggctctgatggag
gagcacacccgccagcagcacaacgagaggctacgcaagcagtttgcggcccaggccaac
gtcatcgggccctggatccagaccaagatggaggagattgggaggatctccattgagatg
catgggaccctggaggaccagctcagccacctgcggcaatacgagaagagcatcgtcaac
tataagcccaagatcgaccagctggagggcgaccaccagctcatccaggaagcactcatc
ttcgacaacaagcacaccaactacaccatggagcacatccgcgtgggctgggagcagctg
ctcaccaccatcgccaggaccatcaacgaggtggagaaccagatcctgaccagggatgcc
aagggcatcagccaggagcagatgaacgagttccgggcttccttcaaccactttgaccgg
gatcactccggcacgctgggtcccgaggagttcaaagcctgcctcatcagcttgggttat
gatattggcaacgacccccagaagaagacaggcatgatggacacggatgatttccgcgcc
tgccttatctccatgggttacaacatgggagaggcagaatttgcccgcatcatgagcatt
gtggaccccaaccgcctaggggtagtgacgttccaggccttcatcgactttatgtcccgt
gagacggctgacacagatacagcagaccaagtcatggcttccttcaagatcctggccggg
gataagaactacatcactgtggacgagctgcgccgtgagctgccgcctgaccaggctgag
tactgcatcgcgcgaatggccccctacaccggccccgacgccgtgccaggtgctctggac
tacatgtccttctccacggcgctgtacggcgagagtgacctctaa

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