Globicephala melas (long-finned pilot whale): 115852674
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Entry
115852674 CDS
T11080
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04110
Cell cycle
gmf04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115852674 (SMC1B)
04114 Oocyte meiosis
115852674 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmf03036
]
115852674 (SMC1B)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
115852674 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
115852674 (SMC1B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
ATG16
AAA_33
Motif
Other DBs
NCBI-GeneID:
115852674
NCBI-ProteinID:
XP_030711511
LinkDB
All DBs
Position
10:4235723..4321243
Genome browser
AA seq
1232 aa
AA seq
DB search
MGRLEVLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIANLRVKT
IQELIHGAHIGKPVSSSASVKIVYVEESGEEKTFARTIRGGCSEYCFNDSPVSRSAYITE
LEKIGIIVKARNCLVFQGTVESISLKKPKERTQFFEEISTSGELIGEYEEKKRKLQKAEE
DAQFNFNKKKNVAAERKHAKLEKEEAERYQSLLEELKKSKIQLQLFQLYHNEKKISFLNS
ELERVNKDLSVTKESLSSHENTVKAKKKEHGMLSRQLQQTEKELKSLEALLNQKRPQYIK
AKENTSHHLKKLDVAKKSIKDSEKQCSKQEDDIKALETELVDLDGAWRSFEKQIEEEILR
KGRDIELEASQLDQYKELKEQVRKKVAIMTQQLEKLHWEQKADEERLAFEKRRHGEAQGN
LKQIKEQIEDHKKRIEKLEEYIKTCMNFLKEKKQQEETLVDEIEKTKSRMSEVNEELNLI
RSELQNAGIDNHEGKRQQKRAEVLEHLKRLHPDSVFGRLLDLCHPIHKKYQLAVTKLLGR
YMFAIVVASEKVAKDCIRFLKEERAEPETFLALDYLDIKPINERLREIKGCKMAIDVIKT
QFPQLKKVIQFVCGNGLVCETVEEARHIAFNGPERRKTVALDGTLFLKSGVISGGSSDLK
YKARCWDEKELKNLRDRRTQLIQELKDLMKTLRKEADLKQIQTLVQGTHTRLKYSQSELE
IIKKKHLAAFYQEQSQLQSELLNIESQCTMLSEGIKQRQRRIEEFEGKIHKVEDDIFQHF
CEEIGVENIREYENRHVKQQQEIDQKRLEFEKQNTRLNVQLEYSRNQLKKKLNKINTLKE
TIQKGREDIDNLKKAEENCLKIVDELMEKRQQLKDTVVTQITNTEKVQAQIEEERKKFLA
VDREVGKWQKKVVILQTSLEQKRLEKHNMLLDCKVQDIEIILLLGSLDDIIEVELGPEAE
STQATMDIYEKEAAIEIDYSSLREDLKALQSDKEIEAHLRLLRQQVASQEDVLLRTAAPN
LRAPENLKTVRDKFQEYTDAFEASRKEARIRRQEFEQVKKRRYNLFSQCFEHVSVAIDQI
YKKLCRNNSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAV
HSFRPAPFFVLDEVDAALDNTNIGKVSSYIKEQTQDQLQMIIISLKEELYCKADALIGIY
PEHDDCMFSRVLTLDLSQYPDTEDKRKQQEAR
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtttggaggtgctgcttgtggagaactttaagtcgtggcggggccgccaggtt
ataggccccttcaggaggttcacctgcatcattggccccaacggctccggaaaatctaat
gtaatggatgcacttagttttgtaatgggagaaaaaatagctaatttaagagtgaaaact
attcaagaacttattcatggagcacatattggaaaacctgtttcttcttctgcaagtgta
aaaattgtatacgtggaagaaagtggagaagagaaaacatttgcaaggactatccgaggg
ggatgctcagaatattgttttaatgatagtcctgtgagtcgttctgcttatatcacagag
ttagaaaagataggcataatagtcaaagcacggaactgtctagtttttcagggaactgtg
gagtcaatttcactgaaaaaacccaaagaaagaacgcagttttttgaggaaatcagcact
tcaggagagcttataggagaatatgaggaaaagaaaagaaagttacagaaagccgaagaa
gatgcacagtttaattttaataagaaaaaaaatgtagctgcagagcgtaaacatgcaaaa
ttagagaaggaagaggcagaacgttaccagagtctccttgaagaactgaaaaaaagcaag
atacaactgcagcttttccaactgtatcacaatgagaaaaaaatttcttttctaaacagt
gagttagagcgtgtgaataaggatttgagtgtcacaaaagagtctctttctagtcatgaa
aacacagttaaagccaagaagaaggaacatggaatgttaagcagacaactgcaacaaaca
gaaaaagaattaaaatctcttgaagcacttttaaatcagaagaggcctcaatacattaaa
gctaaagaaaacacttctcaccacctcaagaagttagatgtggctaagaaatcaataaag
gacagtgaaaaacaatgttctaaacaggaagatgacataaaggccttagagacagagctg
gttgatttagatggtgcatggagaagttttgaaaagcagattgaggaagaaattttacgt
aaagggcgagacattgaactagaagccagtcagctggatcaatacaaagaacttaaggaa
caagtaagaaagaaagtggctataatgacccaacaattggaaaagctgcactgggaacaa
aaggctgatgaagaaagactggcatttgaaaagaggaggcatggggaagctcagggaaat
ctaaaacaaataaaagaacaaatagaagatcataaaaagcgaatagagaagttggaggag
tatataaaaacatgcatgaatttcttgaaagagaaaaaacagcaagaggaaaccctagtg
gatgaaattgaaaagacaaaatcaagaatgtctgaagttaatgaagagctgaatcttatt
agaagtgaactgcagaatgctggaattgataaccatgagggaaaacgtcagcaaaagaga
gcagaggttctggaacaccttaaaagacttcacccagattctgtgtttggaagactgctt
gacctgtgtcatcctatacataagaaataccagctggctgttactaaacttcttggtcgg
tacatgtttgccattgttgtagcctctgaaaaggtagcaaaagattgtattcgatttctg
aaggaggaaagagctgaacctgagacattccttgctttagattaccttgatatcaaacca
atcaatgaaagattacgggagattaaaggctgtaaaatggcgattgatgtcataaagact
cagtttcctcagctgaagaaagtaattcagtttgtgtgtggaaatggccttgtctgtgag
actgtggaagaagcaaggcatattgccttcaatggacctgaaagacggaaaacagtagct
cttgatggaacgttatttttaaaatctggagtcatctctggagggtcaagtgacttaaaa
tacaaggctagatgctgggatgagaaagaattaaagaatttaagagacaggagaactcag
ctaatccaagaattaaaggatttaatgaagacacttcgcaaggaagcagatttgaaacaa
atacagactctagtacaaggaactcatacacgactcaaatattcgcaaagtgaactagaa
ataattaaaaagaagcaccttgctgctttttaccaggaacaatctcagctacaaagtgaa
ctgctaaatattgagtctcaatgtactatgttgagtgaaggaatcaaacaacggcaacga
agaattgaggaatttgaaggaaagatacataaggttgaagatgatatttttcaacacttc
tgtgaagaaattggtgtagaaaatattcgtgaatatgagaacagacatgttaaacagcaa
caagaaattgatcaaaaaagattagaatttgagaaacaaaatactcggcttaatgttcaa
cttgaatatagtcgcaatcagctgaagaaaaaactgaataagattaacacattaaaagaa
actatccagaaaggtagagaagacatcgataacctaaagaaggctgaagaaaattgtctg
aaaattgtggatgaactcatggagaaacggcagcaacttaaggacacagttgtcactcag
attaccaacactgagaaagtccaagctcaaattgaagaggaacggaagaagtttttggca
gttgatagggaagtgggaaaatggcaaaaaaaagttgtaatccttcaaacttctctggaa
cagaagcggttagagaaacataacatgttgcttgattgcaaagtccaagacattgaaata
attcttttgttggggtcactggatgacatcattgaagtggagttgggacctgaagcagaa
agtacccaggcaacaatggatatatatgaaaaagaagccgccattgagatagactacagc
tctctaagagaggatttgaaggctctacaatctgataaagaaattgaggcccaccttaga
ctcctacggcaacaagtagcatcccaggaagatgtcctgctgaggacagcggccccaaac
ctcagagccccggagaacctaaagactgtcagagacaagtttcaggagtacacagacgct
tttgaggccagcagaaaggaagccagaatacgtaggcaagagtttgaacaggtgaaaaaa
aggagatacaatcttttcagccaatgttttgagcacgtctcagtcgcaattgatcagatc
tacaagaagctctgcagaaacaacagtgcccaagcatttcttagcccagaaaacccagaa
gagccttacttggagggaattagctataactgtgtggccccaggcaaacggttcatgcca
atggataatttgtcggggggagaaaagtgtgtggcagctttggctctcctgtttgctgtg
cacagttttcggcctgctccattctttgttttagatgaagtagatgcagccctggacaat
actaacattggcaaagtatcgagttacatcaaagagcagactcaggaccagcttcagatg
atcatcatttccctaaaagaggagttatattgcaaagctgatgcactgataggcatctat
ccagagcatgatgactgcatgttcagccgagttttgaccctagatctgtctcagtatcca
gatactgaagacaagagaaagcagcaggaggcccgttag
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