Globicephala melas (long-finned pilot whale): 115852912
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Entry
115852912 CDS
T11080
Symbol
HCFC2
Name
(RefSeq) host cell factor 2 isoform X1
KO
K27390
host cell factor 2
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115852912 (HCFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmf03036
]
115852912 (HCFC2)
03029 Mitochondrial biogenesis [BR:
gmf03029
]
115852912 (HCFC2)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
115852912 (HCFC2)
Mitochondrial biogenesis [BR:
gmf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
115852912 (HCFC2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
fn3
Kelch_2
Kelch_FKB95
Beta-prop_TYW4
NANM
Motif
Other DBs
NCBI-GeneID:
115852912
NCBI-ProteinID:
XP_060162987
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Position
10:complement(17682170..17767432)
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AA seq
792 aa
AA seq
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MAAPSLLNWRRVSSFTGPVPRARHGHRAVAIRELMIIFGGGNEGIADELHVYNTVTNQWF
LPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNELYELQASRWLWKKVKPYPPPS
GLPPCPRLGHSFSLYGNKCYLFGGLANESEDSNNNVPRYLNDFYELELQHGSGVVGWSIP
VTKGIVPSPRESHTAVIYCRRDSGSPKMYVFGGMCGARLDDLWQLDLETMSWSKPETKGT
VPLPRSLHTASVIGNKMYIFGGWVPHKGENIETSPHDCEWRCTSSFSYLNLDTAEWTTLV
SDSQEDKKNSRPRPRAGHCAVAIGTRLYFWSGRDGYKKALNSQVCCKDLWYLDTEKPPAP
SQVQLIKATTNSFHVKWDEVPTVEGYLLQLNTDLPYQAVSSDSSATPNMQGVRMDPHRQG
SNSIIPNSISDTMNSAKSEHTAMKGTSLKNKPELKASTDSNATLHSSLATNASNHNSCVV
DMLRKNEGPHTSVNIGVLSSCLDLRTVIPETSVSSTVSNAQTMVTQQTIKTESSSTNGAV
VKDETSLTTFSTKSEVDETCALPATKISRVEAHAAVMPFSKETPSNPVATMKAGERQWCD
VGIFKNNTALVSQFYLLPKGKQSISKIGNADVPDYSLLKKQDLVPGTGYRFRVAAINGCG
IGPFSKISEFKTCIPGFPGAPSAVRISKNVEGIHLSWEPPTSPSGNILEYSAYLAIRTAQ
IQDNPSQLVFMRIYCGLKTSCIVTAGQLANAHIDYTSRPAIVFRISAKNEKGYGPATQVR
WLQGNNKKAPLN
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccagcctcctcaactggaggcgggtttcctccttcacggggccggtcccc
cgcgcccggcatggacaccgcgcggtggccatccgggagctgatgatcatctttggaggg
ggcaacgagggcatcgccgacgagctgcacgtctacaacacggttacaaatcagtggttc
ctgccagctgttagaggagacatccctccaggctgtgctgcccatggatttgtctgtgat
ggtaccagaatattagtatttgggggaatggttgaatacggaagatacagcaatgagtta
tatgagttacaagcaagtcgttggttatggaaaaaagtgaaaccgtatcctcctccttct
ggtttacctccttgtcctcggctgggacatagcttctctttatatggtaacaaatgctat
ttgtttggtggcctggcaaatgaaagtgaagattcaaacaataatgttcccagatattta
aatgatttctatgagctggagctacagcatggttctggtgttgtgggttggagcattcca
gtgactaaagggattgtgccttctccaagagaatcccacacagctgttatatattgcaga
agagattcaggaagtcctaaaatgtatgtttttggtggaatgtgtggtgctcgccttgat
gacctatggcaacttgacttagaaactatgtcatggtcaaaaccagaaactaaagggaca
gtgccacttccacgaagccttcatacagccagtgttataggaaataagatgtacatcttt
ggtggatgggttccacataagggggaaaatattgagacttcacctcatgattgtgaatgg
agatgtaccagttcattttcttacttaaatcttgatacagcagagtggaccaccctagta
tcagattctcaagaagacaaaaaaaattcaagaccaagaccaagagctggacactgtgct
gttgcaattggcactcgattgtatttttggagtggaagagatggctacaaaaaagcactg
aatagtcaagtttgctgcaaggatctttggtatcttgatactgagaaaccaccggcacca
tcacaagtacaactgatcaaagccactaccaactcttttcatgtcaaatgggatgaagtg
cctacagttgaaggctatcttttgcagttgaatacagacttgccgtaccaagctgtgtca
tcagattcttcagcaacaccaaatatgcaaggagtcaggatggacccacacagacaaggc
agtaatagcatcattcctaacagtatcagtgatacaatgaacagtgcaaaatctgaacat
acagctatgaaaggaacttcactgaaaaacaaaccagaactcaaagcatcaactgattct
aatgccactttacattcatctttggcaactaacgcttctaatcataacagttgtgtggtg
gatatgctaaggaaaaatgaaggtcctcacacttcagtaaatataggtgttctaagtagt
tgcctggacttaagaacagtaatccctgaaacttctgtatccagtactgtttccaacgca
caaactatggtaacccagcagaccattaaaactgaatcatccagtacaaatggggcagtt
gttaaagatgaaacttcactaacaacattcagtaccaaatctgaagttgatgaaacatgt
gcattacctgcaactaagatcagccgtgtagaggcacatgctgcagtgatgccattttct
aaagagactccttcaaatccagtggccacaatgaaagcaggagaacgacagtggtgtgat
gtaggaatttttaaaaataatacagctttggtgagccagttttatttgctgccaaaaggg
aagcaaagcatctcaaagataggaaatgcagatgtacctgactacagtttacttaagaaa
caagatcttgttccaggcacaggatacagattcagggttgctgccatcaatggttgtgga
ataggccctttcagcaaaatcagtgaatttaaaacttgtattcccggttttcctggagct
ccttctgcagtcagaatttcaaagaatgttgagggtatccatctttcctgggaacctcca
acttcaccttctggaaatattttggaatattcagcctacttggctatccgcacagcacaa
atacaagataatccaagtcagcttgtgtttatgaggatttattgtggtctaaagacatca
tgtatagtaactgctgggcaacttgcaaatgcacatattgattatacatccaggcctgcc
attgtgttcagaatatcggcaaagaatgaaaagggatatggaccagctacacaagttcga
tggcttcaaggtaacaataaaaaagcacctttaaattga
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