KEGG   Globicephala melas (long-finned pilot whale): 115853332
Entry
115853332         CDS       T11080                                 
Symbol
CUL4A
Name
(RefSeq) cullin-4A isoform X1
  KO
K10609  cullin 4
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf03420  Nucleotide excision repair
gmf04120  Ubiquitin mediated proteolysis
gmf05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    115853332 (CUL4A)
  09124 Replication and repair
   03420 Nucleotide excision repair
    115853332 (CUL4A)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    115853332 (CUL4A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gmf04121]
    115853332 (CUL4A)
   03400 DNA repair and recombination proteins [BR:gmf03400]
    115853332 (CUL4A)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gmf04147]
    115853332 (CUL4A)
Ubiquitin system [BR:gmf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     115853332 (CUL4A)
DNA repair and recombination proteins [BR:gmf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      115853332 (CUL4A)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      115853332 (CUL4A)
Exosome [BR:gmf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   115853332 (CUL4A)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW ADH_zinc_N
Other DBs
NCBI-GeneID: 115853332
NCBI-ProteinID: XP_030712556
LinkDB
Position
18:78237825..78283446
AA seq 761 aa
MADETPRKGSFSALVGHTNGLTKPASLAAAAVTSKPGAAGGSKKLVIKNFRDRPKLPDNY
TQDTWQKLHEAVRAIQSSTSIRYNLEELYQAVENLCSHKVSPVLYQQLRQVCEGHVQAQI
LQFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELF
RNHIISDKMVQTKTIDGILLLIKRERSGEAVDRSLLRGLLGMLSDLQVYKDSFELKFLEE
TNCLYAAEGQRLMQEREVPEYLNHVSKRLGEEGDRVITYLDHSTQKPLIACVEKQLLGEH
LTAILQKGLDHLLDENRVPDLTQMYQLFSRVRGGQQALLQHWSEYIKTFGTTIVINPEKD
KDMVQDLLDFKDRVDHVIEVCFQRNEKFINLMKESFESFINKRPNKPAELIAKHVDSKLR
AGNKEATDEELERILDKIMILFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSK
LKHECGAAFTSKLEGMFKDMELSKDIMVHFKQYMQNQSDPGSIDLTVNILTMGYWPTYTP
MEVHLTPEMIKLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKELQVSLLQTLV
LLMFNEGDGFSFEDIKMATGIEGSELRRTLQSLACGRARVLIKSPRGREVEDGDRFVFNG
EFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSE
LYNQLKFPVKPGDLKKRIESLIDRDYMERDQDSPNQYRYVA
NT seq 2286 nt   +upstreamnt  +downstreamnt
atggccgacgagacccctcggaagggcagcttctcggcgcttgtcggacacaccaacggc
ctcaccaagcccgcgtctctcgccgcggccgccgtcacctccaagcccggagccgccggc
ggctccaagaagctcgtgatcaagaatttccgagacagacctaaattgcctgacaactac
actcaggacacctggcagaaacttcatgaagcagtgagagccatacagagtagcacgtcc
atcagatataacctggaagagctctaccaggctgttgaaaacctttgttctcacaaagtt
tccccagtgctctaccagcagctgcgccaggtctgtgaaggccacgtccaagcacaaatc
cttcagtttagagaagactcgctagatagtgttttatttttaaagaagattaacacatgc
tggcaggatcactgcagacaaatgatcatgatcagaagcatcttcctgtttctggatcgt
acttacgtgcttcagaattccatgcttccttccatctgggatatgggattagaactattc
agaaaccatattattagtgataaaatggttcagacaaagaccatcgacggcatcctgctg
ctgatcaagcgggagcggagcggggaggccgtggaccgcagcctgctgcggggcctgctg
ggcatgctgtccgacctccaggtgtataaagattcatttgaactgaaatttttggaagaa
actaattgtttatatgctgcagaaggccaaaggttaatgcaagaaagagaggttccggag
tacctgaaccatgtgagtaagcgcctgggggaggagggtgaccgcgtgatcacgtatcta
gaccacagcacacagaaaccactgattgcctgtgtggagaagcagctgttaggagaacat
ttaacagcgattctgcagaaagggctggaccacctgttggatgagaacagagtgcctgac
ctcactcagatgtaccagctgttcagccgcgtgcggggcggccagcaggcgctgctgcag
cactggagcgagtatatcaagacttttgggacaacaattgttatcaatcctgaaaaagat
aaagatatggtgcaggacctgctggatttcaaggaccgagtagaccacgtgatagaagtg
tgcttccagaggaacgagaagttcatcaacctgatgaaggagtccttcgaatcgttcatc
aacaagaggccaaacaaacctgcagagctgatcgcaaagcacgttgattcaaaattgaga
gcaggtaataaggaagcaacggacgaggagctggagaggatcctggacaagatcatgatc
ctattccggttcattcacggtaaagatgtctttgaggcattttataagaaagatttagca
aaaagactcctcgttggaaaaagtgcctccgttgatgctgaaaagtctatgctgtcaaag
ctgaagcacgagtgtggggctgctttcaccagcaagctggaaggcatgttcaaggacatg
gagctctctaaggacatcatggttcatttcaagcagtatatgcagaatcaaagtgaccca
ggctctatagacctgacagtgaacatacttacgatgggatactggccgacatacaccccc
atggaagtacatctaactccagagatgattaaacttcaggaagtattcaagacgttttat
cttggaaagcacagcggtcgaaagcttcagtggcaaactacactgggtcacgccgtgttg
aaagcagagtttaaagaggggaagaaggagctgcaggtgtcgctgctccagacgctggtg
ctcctcatgttcaacgaaggcgacggattcagctttgaggacataaagatggccaccggg
atagagggcagcgagctgcggaggacgttgcagtccctggcctgcgggagggcgcgcgtg
ctgatcaaaagtcccagagggagggaggtcgaagatggagacagattcgtcttcaatgga
gagttcaagcacaagttgtttcggatcaagatcaatcagatccagatgaaggaaaccgtt
gaagagcaggccagcaccacagagcgcgtgttccaggaccggcagtaccagatcgacgcc
gccatcgtcaggataatgaagatgagaaagacgctgggccacaacctgctcgtttccgaa
ttgtataatcagctgaagtttcccgtcaagcctggagatttgaaaaagagaatcgaatct
ctcatagacagagactacatggagagagaccaggacagtcccaaccagtaccgctacgtg
gcctga

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