Globicephala melas (long-finned pilot whale): 115853580
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Entry
115853580 CDS
T11080
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf02010
ABC transporters
gmf04976
Bile secretion
gmf05206
MicroRNAs in cancer
gmf05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115853580 (ABCB1)
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
115853580 (ABCB1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
115853580 (ABCB1)
09162 Cancer: specific types
05226 Gastric cancer
115853580 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmf02000
]
115853580 (ABCB1)
04147 Exosome [BR:
gmf04147
]
115853580 (ABCB1)
04090 CD molecules [BR:
gmf04090
]
115853580 (ABCB1)
Enzymes [BR:
gmf01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
115853580 (ABCB1)
Transporters [BR:
gmf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
115853580 (ABCB1)
Exosome [BR:
gmf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115853580 (ABCB1)
CD molecules [BR:
gmf04090
]
Proteins
115853580 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
RsgA_GTPase
Rad17
AAA
Zeta_toxin
AAA_5
AAA_14
AAA_29
SbcC_Walker_B
G-alpha
AAA_7
APS_kinase
AAA_30
PRK
DUF815
NTPase_1
AAA_15
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
115853580
NCBI-ProteinID:
XP_030712883
LinkDB
All DBs
Position
9:75461527..75572309
Genome browser
AA seq
1284 aa
AA seq
DB search
MDLEEGRSGSAGGENFLKKDKKRFFSKKDEKKEKKPTVSTFAVFRYSNWLDKLYMVLGTV
AAIIHGAGLPLTMLVFGDMTDSFANAGNLGNLTISQLTNGSFLDSTYFGEKLEEEMTTYA
YYYSGIGAGVLVAAYLQVSFWCLAAGRQVYKIRKQFFHAVMRQEVGWFDVHDTGELNTRL
SDDVSKINEGIGDKIGIFFQSMATFFTGFTVGFTQGWKLTLVILAVSPVLGLSAAIWAKI
LSSFTDKELLAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEEAKRIGIKKAITA
NISMGAAFLLIYASYALAFWYGTSLVLSEDYSIGQVLTVFFSVLIGAFSVGQASPSIEAF
ANARGAAYEIFKIIDNKPSIDSYSKNGCKPDNIKGNLEFRNVHFNYPSRNEVKILKGLNL
KVESGQTVALVGNSGCGKSTTVQLIQRLYDPTEGVISIDGQDIRTINVRYLREIIGVVSQ
EPVLFATTIAENIRYGRENVTMDEIEKAVKEASAYDFIMKLPNKFDTLVGERGAQLSGGQ
KQRIAIARALVRNPKILLLDEATSALDTESEAVVQVALDKAREGRTTIVIAHRLSTVRNA
DVIAGLDDGVTVEKGSHDELMKEKGIYFKLVTMQTKGNEIELENAAGGSKSEIDALDMSP
KDLGSSLIRRKSTRKSIHGPQSQNRKLSTEETSDENVPPVSFWRILKLNITEWPYFVVGI
FCAIVNGGLQPAFSVIFSRIIGVFTRDDDPETKRQNSNLFSLLFLILGIISFITFFLQGY
TFGKAGEILTKRLRYMVFRSMLRQDVSWFDDPKNTTGALTTRLANDAAQVQGAIGSRLAV
ITQNIANLGTGIVISLIYGWQLTLLLLAIVPIIAVAGVIEMKMLSGQALKDKKELEDAGK
IATEAIENFRTVVSLTREEKFEYMYALSLQVPYRNSLRKAHIFGITFSITQAMMYFSYAG
CFRFGAYLVAHGIIDFQDVLLVFSAIVFGAMAVGQVSSFAPDYAKAKVSAAHVIMIIEKA
PVIDSYSTEGLKPNTVEGNVTFNEVVFNYPTRPDIPVLQGLSLEVKKGQTLALVGSSGCG
KSTVVQLLERFYDPLAGTVLIDGKEIKHLNVQWLRAHMGIVSQEPVLFDCSIGENIAYGD
NSRVVSQEEIVQAAKEANIHPFVETLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPR
ILLLDEATSALDTESEKVVQEALDKAQEGRTCIVIAHRLSTIQNADLIVVFQNGKVKEHG
THQQLLAQKGIYFSMVSVQAGAKR
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgaagaaggccgcagtggaagtgcagggggggagaacttcttgaaaaaggac
aagaaaaggtttttcagtaaaaaagatgagaagaaagaaaagaaaccaactgtcagtact
tttgcagtgtttcgctattcgaattggcttgataagttgtatatggtgttggggactgtg
gccgccatcatccacggagccggactgcccctcacgatgctggtttttggagacatgacg
gatagctttgcaaatgcaggaaatttaggaaacctgactatttcacaactaactaatgga
agttttctggacagtacgtatttcggcgaaaagctggaggaggaaatgaccacgtacgcc
tattattacagtggaatcggggctggcgtgcttgtcgccgcttacctccaggtttcattc
tggtgcctggcagcaggaagacaagtatacaaaattagaaaacagttttttcatgctgtc
atgcggcaggaggtaggctggtttgacgtgcatgacactggggagcttaacacccggctc
tcagatgacgtctccaaaattaatgaaggaattggtgacaaaattggaatattctttcag
tcaatggcaacattcttcaccggttttacagtaggatttacacaaggttggaagttaacc
cttgtgattttagccgtcagtcctgttcttggtctgtcagctgctatctgggcaaagata
ctatcttcatttactgataaagaactcttggcatatgcaaaagctggagcagtagctgaa
gaggtgttagcagcgattagaactgtgattgcatttggaggacaaaagaaagaacttgaa
aggtacaacaaaaatttggaagaagctaaaagaattggaataaagaaagctattacagcc
aacatttctatgggtgctgctttcctgttgatctatgcatcatacgctctggcattctgg
tatgggacctccttagtcctgtcagaagattattctattggacaagtactcactgtcttc
ttttccgtattaattggggcttttagtgttggacaggcatctccaagcattgaggcattt
gcaaatgcaagaggagcagcttatgaaatctttaagatcattgataacaaaccaagcatc
gacagctattcgaagaacgggtgcaaacccgataatattaagggaaatctggaattcaga
aatgttcacttcaattacccatctcgaaacgaagttaagatcttgaagggcctcaacttg
aaggtagagagcgggcagacggtggcactggttggaaacagcggctgtgggaaaagcacg
acagtccagctgatacagaggctctatgaccccacggagggcgtgatcagtattgatgga
caggacatcaggaccatcaatgtcaggtatctgcgggaaattatcggtgtggtgagtcag
gaacctgtgttgtttgctaccaccatagccgagaacattcgctacggccgtgaaaatgta
accatggatgagattgagaaagctgtgaaggaagccagcgcctatgacttcatcatgaaa
ctgcctaataaatttgacaccctggttggagagagaggggcccagctgagtggtggacag
aagcagagaatcgccatcgctcgggctctggttcgcaaccccaagatcctgctgctggat
gaggccacctcagcgctggacactgagagcgaagcagtggttcaggtggccctggataag
gccagagaaggccggaccaccattgtgatcgcgcatcgtttgtccacagttcgtaatgct
gatgtcattgctggtcttgatgatggagtcactgtggagaaaggcagtcatgatgaactc
atgaaggagaaaggcatttacttcaaacttgtcacaatgcagacaaaaggaaatgaaatt
gaattagaaaatgcagctggtggatccaaaagtgaaattgatgccttggacatgtccccc
aaagatttaggatccagtctaataagaagaaaatcaactcgcaagagtatccatggacca
caaagccaaaacagaaagcttagtacagaagagacttcggatgaaaatgtacctccagtt
tctttttggaggattctgaagctgaatataactgaatggccttattttgtggttggtata
ttttgtgccattgtaaatggaggtctgcaaccagcattttcagtaatattttcaaggatt
ataggggtttttaccagagatgacgatcctgaaaccaaacgacagaatagtaacttgttt
tcactcttgtttctaatccttggaattatttcttttattacgtttttccttcagggctac
acgtttggcaaggccggagagatcctcaccaagcggctccgatacatggttttcagatcc
atgctgagacaggatgtgagctggtttgacgaccctaaaaacaccacgggagccttgacg
accaggctggccaatgatgctgctcaagttcaaggggctataggttccaggcttgctgta
attacccagaatatagcaaatcttgggacaggcattgttatatccttaatctatggctgg
cagttaacacttttactgttagcaattgtacccatcattgcagtagcaggagttattgaa
atgaaaatgctgtctggacaagcactgaaagataagaaagaactagaagatgctgggaag
attgccacggaagcaatagaaaacttccgaactgttgtttctttgactcgggaggagaag
tttgaatatatgtatgccctgagtttgcaggtaccatacagaaactctttgaggaaagca
cacatctttggaatcacgttttccatcacccaggcaatgatgtatttttcttacgctggc
tgtttccgttttggcgcctacctggtggcacatggcatcatagactttcaggatgttctc
ttagtgttctcagccattgtctttggcgcgatggctgtgggtcaggtcagttcatttgct
cctgactatgccaaggccaaagtgtcagcagcccacgtcatcatgatcattgaaaaagcc
cctgtgatcgacagctacagcacggaaggcctgaagccgaatacagtggaaggaaatgtg
acatttaatgaagtcgtgttcaactatcccactcgaccagacatcccagtgcttcagggg
ctgagccttgaggtgaagaagggccagacgctggccctggtgggcagcagcggctgtggg
aaaagcacggtggtccagctcctggagcggttctacgaccccttggctggaacagtgcta
attgacggcaaggaaataaagcacctgaatgtccagtggctccgagcacacatgggcatc
gtgtcccaggagcctgtcctgtttgactgcagcatcggcgagaacatcgcctacggggac
aacagccgggtcgtgtcacaggaggagatcgtgcaggcagccaaggaggccaacatacac
cccttcgtcgagacgctgcctgataaatataacaccagagtaggagacaaaggaactcag
ctctctggtggccagaagcagcgcattgcgatagctcgtgcccttgttagacagcctcgt
attttgcttctggatgaagctacatcagctctggatacagaaagtgaaaaggttgtccaa
gaagccctggacaaagcccaagaagggcgcacctgcatcgtcatcgctcaccgcctgtcc
accattcagaatgcagacttgatagtggtgtttcagaacggcaaagtcaaggagcacggc
acacaccagcagctgctggcacagaaaggcatctatttctccatggtcagtgtccaggct
ggagcaaagcgctag
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integrated database retrieval system
