Globicephala melas (long-finned pilot whale): 115853581
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Entry
115853581 CDS
T11080
Symbol
ABCB4
Name
(RefSeq) phosphatidylcholine translocator ABCB4
KO
K05659
ATP-binding cassette, subfamily B (MDR/TAP), member 4 [EC:
7.6.2.2
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf02010
ABC transporters
gmf04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115853581 (ABCB4)
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
115853581 (ABCB4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmf02000
]
115853581 (ABCB4)
Enzymes [BR:
gmf01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
115853581 (ABCB4)
Transporters [BR:
gmf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
115853581 (ABCB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Rad17
RsgA_GTPase
Zeta_toxin
AAA_5
AAA
AAA_14
AAA_29
nSTAND1
G-alpha
AAA_28
AAA_15
AAA_30
SbcC_Walker_B
APS_kinase
PRK
AAA_7
NB-ARC
DUF815
DUF87
NTPase_1
DUF2207_C
RuvX
Motif
Other DBs
NCBI-GeneID:
115853581
NCBI-ProteinID:
XP_060160708
LinkDB
All DBs
Position
9:75593823..75667838
Genome browser
AA seq
1276 aa
AA seq
DB search
MDLEAGRLATVRIPKNTEDEFERGSSNSKQDKEKTKKVNLIGPLTLFRYSDWQDKLFMSF
GTIMAIAHGSGLPLMMIVFGEMTDRFVNIGGNFSFPVNFSLLMLNPARILEEEMTRYAYY
YSGLGAGVLVAAYIQVSFWTLAAGRQIKKIRQEFFHAILRQEIGWFDINDTTELNTRLTD
DISKISEGIGDKVGMFFQAIATFFAGFIVGFLRGWKLTLVIMAISPILGLSTAVWAKILS
AFSDKELAAYAKAGAVAEEALGAIKTVIAFGGQNRELKRYQKHLENAKKIGIKKAISANI
SMGIAFLLIYASYALAFWYASTLVIAKEYTVGNAMTVFFSIMIGAFSVGQAAPCIDAFAN
ARGAAYAIFAIIDNNPKIDSFSERGHKPDNIKGNLEFKDVHFCYPARPDVKILKALNLKV
ESGQMVALVGNSGCGKSTVVQLIQRLYDPTEGMITIDGQDIRMFNVRYLREIIGVVSQEP
VLFSATIAENIRYGRGNVTMDEIKKAVKEANAYEFIMKLPQKFDTLVGERGAQLSGGQKQ
RIAIARALVRNPKILLLDEATSALDTESEAEVQAALDKAREGRTTVVIAHRLSTIRNADV
IAGFEDGVIVEQGSHKELMKKEGVYFRLVNMQTLGSQIQPEEFKVARTDENPAMGLARPV
VRSSFHKSLRNSRKYQNAFDVETIELDETVPPVSFMKILKLNKTEWPYFVVGTLCAVANG
ALQPAFSVIFSEIIEIFGPGDDEVKQQKCNMFSLLFLGLGIISFFTFFLQGFTFGKAGEI
LTTRLRSMAFKAMLRQDMSWFDDHKNSTGALSTRLAIDASQVQGATGTRLALIAQNTANL
GTGIIIAFVYGWQLTLLMLSVVPIIAVSGIVEMKLLAGNAKRDKKELETVGKIATEAIEN
IRTVVSLTQERKFESMYVEKLYGAYRNSVRKAHIYGITFSISQAFMYFSHAGCFRFGAYL
IVNGHMHFRDVILVFSAIVLGAVALGHASSFAPDYAKAKLSAAHLFSLFERQPLIDSHSE
EGLRPDKFEGNVTLNEVVFNYPTRPNVPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLL
ERFYDPSAGTVLLDGQEAKKLNIQWLRAQLGIVSQEPILFDCSIADNIAYGDNSRSVKMP
EIVSAAKAANIHPFIETLPKKYETRVGDKGTQLSGGQKQRIAIARALIRHPRILLLDEAT
SALDTESEKIVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIENGKVKEHGTHQQLLAQ
RGIYFSMVNVQAGTQK
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggatctagaggcgggaaggctcgcaacagtccggatccccaagaatacggaggacgaa
tttgaacgtggcagcagcaacagcaaacaagataaggagaaaacgaagaaagtaaatttg
attggaccattaacattgtttcgatattctgattggcaggataaattatttatgtccttt
ggcactatcatggccatagctcatgggtcaggtctccccctcatgatgatagtatttgga
gaaatgactgacagatttgttaatattggaggaaacttctcctttccagtgaatttttcc
ttgttaatgctaaatccagccagaattctggaagaagaaatgactagatatgcatattat
tattcaggattaggtgctggagttcttgttgctgcctatatacaagtttcattttggact
ttggcagctggccgacagattaagaaaattaggcaagagttttttcatgctattctacga
caggaaataggctggtttgacatcaatgacaccactgaactcaatactcggctaacagat
gacatctccaaaatcagtgaaggaattggtgacaaggttggaatgttctttcaagcaata
gccacgttttttgcaggattcatagtggggtttctcagaggatggaagctcacccttgtg
ataatggccatcagccctatcctgggactctctacagctgtttgggcaaagattctctca
gcatttagtgacaaagaactagctgcatatgcaaaagcaggcgctgtggcagaagaggct
ctaggggccatcaagactgtgatagcttttgggggccagaacagagagctgaaaaggtat
cagaaacatctagaaaatgccaaaaagattggaattaaaaaagctatttcggcgaacatt
tccatgggcattgccttcctgttaatatatgcatcatatgcgctggccttctggtatgcg
tccactctagttatagcaaaagaatacactgttggaaatgcaatgacagtctttttctca
atcatgatcggagccttcagcgttggacaggctgctccctgtattgatgcttttgccaat
gcaagaggagcagcatatgcaatctttgctattattgataataatcctaaaattgacagt
ttttcagagagaggacacaaaccagataacatcaaagggaatttggagttcaaagatgtt
catttctgttatccagctcgacctgatgtcaagatcttaaaggccctcaacttgaaggta
gagagcggtcagatggtggccctggttgggaacagcggctgtgggaaaagcacggtggtc
cagctgatacagaggctctatgaccccacagagggcatgattaccatcgatgggcaggat
attaggatgtttaacgtaaggtatctgagggaaataattggagtggtgagtcaggagccg
gtgctgttttctgccaccattgctgaaaatattcgttatggccgtggaaatgtaacaatg
gatgaaataaagaaagctgtcaaggaagccaacgcctatgagtttatcatgaaactacca
cagaaatttgacaccctggttggagagagaggggcccagctgagtggtggacagaagcag
agaatcgccatcgctcgagctctggttcgcaaccccaagatcctgctgctggatgaggcc
acctcagcgctggacactgagagcgaagctgaggtacaggcagctttggataaggccagg
gaaggccggaccaccgtagtgatagcacaccgattgtctacaatccgaaatgcagatgtc
attgctgggtttgaggatggagtcattgtggagcaaggaagccacaaagaactaatgaag
aaggaaggggtgtacttcaggcttgttaacatgcagacattaggaagccagatccagcca
gaagaatttaaagttgcacgaactgatgaaaaccctgccatgggtttggctcgtcccgta
gtcaggagttcttttcataaaagcctgaggaattcgcgaaagtatcagaatgcctttgat
gtggaaaccattgaacttgatgaaactgtgccgccggtgtcttttatgaagatcctgaaa
ctgaataaaacagaatggccctactttgtggtgggaactctgtgtgctgttgccaacggg
gcgcttcagccggctttctcggtcatcttctcagagattatagagatttttggaccaggg
gacgatgaagtgaagcagcagaaatgcaacatgttctcattgctctttttaggtctggga
attatttctttttttactttcttccttcagggcttcacatttgggaaggctggcgagatc
ctcaccacaaggctgcggtccatggcttttaaagcaatgctgagacaggacatgagctgg
tttgatgatcataaaaacagtactggtgcactttctacaagacttgcgatagatgcctcc
caagtccaaggggccactgggaccaggttggctttaattgcacagaacacagctaacctt
ggaactggcatcatcatagcatttgtctatggttggcaattaacccttttgatgttatcg
gttgttccaattattgctgtatcaggaattgttgaaatgaaattgctggctggaaatgcc
aaaagagataaaaaagaactggaaactgttggaaagattgcaacagaggcaatagaaaat
attaggacagttgtgtccttgacccaggaaagaaaatttgaatcaatgtatgttgaaaaa
ttgtatggagcttacaggaattctgtgcggaaagcacacatctatggaattacttttagt
atttcacaagcatttatgtatttttcccatgccggttgttttcggtttggtgcctatctc
attgtgaatggacatatgcacttcagagacgttattctggtgttttcagcgatcgtgttg
ggcgccgtggctctaggacacgcgagttcctttgctccagactacgctaaagccaagctg
tctgcagcgcacttattcagcctgtttgaaagacaacctttgattgacagccacagtgag
gaaggcctgagacctgataagtttgaaggaaacgtgacacttaatgaagtcgtgttcaac
tatcccacgcggccaaatgtgcccgtgcttcaggggctgagcctcgaggtgaagaagggc
cagacgctggccctggtgggcagcagcggctgtgggaagagcacggtggtccagctcctg
gagcggttctacgacccctctgctggaacagtgctcctagatggtcaagaagcaaagaaa
ctcaacatccagtggctcagagcccaactcggaattgtgtcccaggagcccatcctgttt
gactgcagcattgccgacaacattgcctatggagacaacagccggtctgtaaagatgcct
gaaattgtgagtgccgccaaagcagccaacatccatcctttcattgagactttacccaaa
aaatatgaaacaagagtgggagataaggggactcagctttcaggaggtcaaaaacagagg
attgctattgcccgagccctcatccgacacccccgaatcctactgttggatgaagctaca
tcagctctggatactgaaagtgaaaagattgtccaagaagctctggacaaagcccgagaa
ggccgcacctgcattgtgatcgctcaccgcctgtccaccattcagaatgcagacttgata
gtggtgattgagaacggcaaagtcaaggagcacggcacacaccagcagctgctagcacag
agaggcatctatttctctatggtcaatgtccaggcagggacacagaagtga
DBGET
integrated database retrieval system
