Globicephala melas (long-finned pilot whale): 115853695
Help
Entry
115853695 CDS
T11080
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115853695 (VPS50)
Membrane trafficking [BR:
gmf04131
]
Protein recycling
Others
EARP complex
115853695 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
115853695
NCBI-ProteinID:
XP_030713119
LinkDB
All DBs
Position
9:56225020..56360756
Genome browser
AA seq
964 aa
AA seq
DB search
MQRIKSLMTRQGLKSPPESLSDVGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSTDSFDIVKYELEKLPPVLNLQDLEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDSEDTTSASEG
SNMMGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPNKQPSSTSSKMVTLFEQYCSGGNPFEIQADHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKQDYVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTATLTAAEERKEKVPSPHLSHLVVLTFG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNTRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLSAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagaatcaaatctcttatgacccggcagggtctgaaaagtcccccagagagcctc
agtgatgttggtgccattgagagtctccgggtccctggaaaggaggaatttcgagaactt
cgagaacaacctagtgatcctcaagctgaacaagaactaattaatagtatcgaacaagtg
tatttttctacggactcatttgatattgttaaatatgagctggagaagctccctcctgtt
ctcaatttgcaagacttagaggagtacagagacaaattaaaacaacagcaagctgcagtc
tctaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtaaaggaacttgaa
agagttacctcattacagacaggtcttcagttagctgctgttatctgcacaaatgggagg
agacacttgaatattgcaaaggaaggttttactcaagctagtttaggccttcttgcaaat
caaaggaaacgtcagttgctgattggacttctgaaatctctgagaactataaaaacattg
caaagaacagatgtccgcttaagtgaaatgctggaggaggaagactatccaggagctatt
cagctgtgcctggaatgtcagaaagctgctagcacttttaaacattacagttgcataagt
gaactgaattcaaagctgcaagatactttagagcaaattgaggaacagttggatgttgct
ctgtccaaaatctgcaagaattttgacattaaccattataccaaggttcaacaagcttat
cgacttcttggaaaaacacagacagcaatggatcaacttcatatgcacttcacccaagcc
attcataatactgtgtttcaagttgttcttggttatgtggaactatgtgcaggaaacaca
gatacaaaattccaaaagctgcaatataaggatctctgtacgcatgttacaccagacagc
tatattccatgccttgctgacctgtgcaaagcactgtgggaggttatgctcagctattac
agaactatggaatggcatgaaaagcatgacagtgaagatactacttctgcttctgaaggg
agtaatatgatgggtactgaagaaacaaattttgatcgtggctacataaaaaagaaatta
gaacatggacttacacgaatatggcaggatgttcagctaaaagtaaaaacctacttgctt
ggaactgatttgtcaatattcaaatatgatgacttcatctttgttttggatataatcagc
aggttgatgcaagttggagaagaattctgtggtagcaagtctgaagttttgcaagagtct
attagaaaacaaagtgtcaattattttaagaactaccatagaacacggcttgatgaactg
agaatgtttctagaaaatgagacctgggaactttgtcctgttaagtcaaatttcagcatc
ttgcagcttcacgaatttaaattcatggaacagtcacgttctccatcagtttcacccaat
aagcagccatcctcaacttcctcaaaaatggtaaccttgtttgagcagtactgtagtggt
gggaatccatttgaaattcaggctgaccacaaagatgaagaaacagaagacgtcctggct
tctaatgggtatgaatctgatgaacaagaaaaaagtgcctatcaggagtatgacagtgac
agtgatgttcctgaggaactaaaacaagattatgttgatgagcagacaggcgatgctcct
gtgaaaagcgtttctcgagagactctaaaaagcaggaagaaatcagattacagtctaaat
aaagtgaatgcacccatcttaacaaatacaacactgaatgtaataagacttgttggtaaa
tatatgcagatgatgaacattcttaaaccaattgcttttgatgttatccatttcatgtct
cagctatttgattattacttgtatgcaatatataccttttttggtcggaatgattcattg
gaatccacgggactaggtcttagcagtagtagactaagaacaactctaaacagaatacaa
gaaagcctcattgatctggaagtttcagctgatcctactgccacgctcacagcagcagaa
gagagaaaggagaaggtaccgagccctcacctcagtcacctagtggttttgacatttggg
gatacattgtatgggttggcggaaagagtggtagccacagaatccttggtattcttggct
gaacagtttgagttccttcagccacatctggatgctgtgatgcctgcagtcaaaaaaccc
tttcttcagcagttttattctcagaccgtctcaacagccagtgaactacgcaaaccaatt
tactggattgtagctggtaaagccattgattatgaacagatgctgctcctaatggctaat
gtgaaatgggatgtaaaagaaattatgtcacagcacaacatatatgtagatgcactgtta
aaggaatttgagcagtttaacacgaggttaaatgaagtttctaagagagttcggataccc
ttgcctgtgtctaatatactttgggaacattgtatacgtctggctaatagaacaattgtg
gaaggatatgccaacgtcaagaagtgtagtaatgagggtcgtgccttgatgcaattggat
tttcagcagtttttaatgaaacttgaaaaactaacagatattagaccaattccagataaa
gaatttgtggaaacctatattaaagcttactatctaactgagaatgacatggaacgctgg
atcaaagagcatagggagtattcgacgaagcagctgaccaatctggtaaatgtttgcctg
ggatcccatatcaataagaaagcaagacaaaaacttctctcagctatagatgatatagac
agacccaaaagataa
DBGET
integrated database retrieval system
