Globicephala melas (long-finned pilot whale): 115853738
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Entry
115853738 CDS
T11080
Symbol
GSDME
Name
(RefSeq) gasdermin-E
KO
K22146
gasdermin-E
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
115853738 (GSDME)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmf02000
]
115853738 (GSDME)
Transporters [BR:
gmf02000
]
Other transporters
Pores ion channels [TC:
1
]
115853738 (GSDME)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
Ig-like_KY
PolyG_pol
Motif
Other DBs
NCBI-GeneID:
115853738
NCBI-ProteinID:
XP_030713228
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All DBs
Position
9:50522243..50625005
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AA seq
496 aa
AA seq
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MFAKATRNFLREVDAGGNLITVSNLNDSDKLQLLSLVTKKKRLWCWQRPKYQFLSVTLGD
VLTEDQFLSPVVVESDFVKYEGKFENHVSGTLETALGKVKLNIGGKGLVESQSSFGTLRK
QEVDLQQLIGVAQERTINLKNSVLQQVLERKNEVLCVLTQKIVTTRKCVISEHVQIEEKC
GGMVGIQTKTVQVSATEDGNIIKDSNVVLEIPAPTTIAYGVIELYVRADGQFEFCLLQGK
HGGFEHERRSDSAFLDLLPLREFAFWDTPDAGQGLPASDGPLSVLKQAPLFLERNFHPFV
ELPEQQQRALNDVLQAVLFDEELLLVLEQVCEDIVSSLSPSLAVLGKLKPSQQRDLVAFL
RLVGYSVQGECPGPEDVVHNQKLLSTAYFLVSALAEMPDNAAGLLGTCCKLQIIPTLCHL
LRALSDDGVSDLEDPVLAPLKDTERFGIVQRLFASADINLERLQPSVKVTTPKDPNVFPL
ILYISLNGLCALGRAQ
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaaagcaacaaggaattttcttagagaagttgatgctggaggtaacctgatc
acagtatcaaatttgaatgactctgataaattacaacttctaagtctggtgaccaaaaaa
aagagattgtggtgctggcagagacccaaataccagtttttatctgtcaccctgggagat
gtactcacagaagaccagtttctgagtccagtggtcgtggagtcggactttgtgaagtac
gagggcaagtttgaaaaccatgtgagtgggaccctggagacggcactggggaaggtcaag
ctgaacattggtggcaaaggcctcgtggagagtcagtcctcgtttggaaccctgaggaag
caggaggtggacttgcagcagctcattggagttgcccaggagagaacaataaatctgaag
aattcagtgctgcagcaggtgctggagaggaagaatgaggtcctgtgtgtcctgacacag
aagatagtgacgacgcggaagtgtgtgatatccgagcacgtccagatcgaggagaagtgc
ggtggcatggtggggatccagaccaagaccgtgcaggtgtcagcgacggaggatgggaac
atcatcaaggacagcaatgtggtgctggaaatcccggctcccaccaccatcgcctacggc
gtcatcgagctgtatgtgagagcagacggccagttcgaattctgcctcctgcaagggaag
cacgggggcttcgagcacgagaggagaagtgactctgccttcctggacctcctgccctta
cgagagtttgcgttctgggacacgccagatgctgggcaagggctgcctgcctcggatggg
ccactgagtgttttaaaacaagcccctctgttcttggagaggaatttccatccctttgtg
gagctgccagagcagcaacagagagctctgaatgacgtcctccaggcggtcctgtttgat
gaagaattactcttggttctggagcaagtgtgtgaggacatagtcagcagcctgtcaccc
tcattggcggtgctggggaagctgaagccttcacagcagcgggacctcgtggccttcctg
cggctagtggggtacagtgtgcagggcgagtgtccaggcccagaggatgtggtccacaac
cagaaactcctttctacggcctacttcttggtcagtgcgctagcagaaatgccagataac
gcagcaggtctgctgggcacttgttgtaagctccagattattcctacactgtgccatctg
ctccgtgctctgtctgatgatggtgtgtctgatcttgaagacccagtcttggctccactg
aaagatacagaaaggtttgggatcgtgcagcgtctgtttgcctcagctgacattaacctg
gagagactgcaaccttctgtgaaagttaccaccccgaaggaccctaacgttttcccactg
attctttatataagcctgaatggactgtgtgctttgggcagagcacagtaa
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