Globicephala melas (long-finned pilot whale): 115853827
Help
Entry
115853827 CDS
T11080
Symbol
GPC1
Name
(RefSeq) glypican-1 isoform X2
KO
K08107
glypican 1
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf05205
Proteoglycans in cancer
gmf05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
115853827 (GPC1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
115853827 (GPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gmf00535
]
115853827 (GPC1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gmf00537
]
115853827 (GPC1)
Proteoglycans [BR:
gmf00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
115853827 (GPC1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gmf00537
]
Others
115853827 (GPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Motif
Other DBs
NCBI-GeneID:
115853827
NCBI-ProteinID:
XP_030713435
LinkDB
All DBs
Position
7:complement(1032417..1061624)
Genome browser
AA seq
559 aa
AA seq
DB search
MELRARGWWLLCVAVALAACAHGDPASKSRSCGEVRHIYGTKGFSLSDVPQAEISGEHLR
ICPQGYTCCTSEMEENLANRSRAELETALLDSGRALQATLATQLRGFDDHFQRLLNDSER
ALQETFPGAFGELYVQNAKAFRDLYAELRLYYRGANLHLEETLAEFWARLLERLFRQLHP
QLLLPDDYLDCLGKQAEPLRPFGEAPRELRLRATRAFVAARAFVQGLGVASDVVRKVAQV
PLSPECSRAVMKLVYCAHCLGVPGARPCPDYCRNVLKGCLANQADLDAEWRNLLDSMVLI
TDKFWGPTGAESVIGGVHLWLAEAISALQDNSDTLTAKVIQGCGNPKVNPQGPEPEEKRR
RGKLALPEKPPAGTLQKLVSEAKAQLRDAQDFWISLPGTLCSEKLAMSAASDDRCWNGVA
KGRYLPEVMGDGLANQINNPEVEVDITKPDMAIRQQIMQLKITTNRLRGAYNGNDVDFQD
ASDDGSGSGSGEGCPDDECGRRVGRKSSSSRTPLSHALPGLSEREGQKASATGRPQPCTR
LLLLSGLPLVLSAARPRWR
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggagctccgggcccgaggctggtggctgctgtgcgtggccgtcgcactggccgcctgc
gcccacggggaccctgccagcaagagtcggagctgcggcgaagtccgccacatctacggg
accaagggcttcagcctgagcgacgtgccccaggcggagatctcgggtgagcacctgcgg
atctgcccccagggctacacctgctgcaccagcgagatggaggagaacctggccaaccgc
agccgggccgagctggagacggcgctcctggacagcggccgggccctgcaggccacgctg
gccacccagctgcggggctttgacgatcacttccagcgcctgctgaacgactcggagcgg
gcgctgcaggagaccttcccgggcgccttcggggagctgtacgtgcagaacgccaaggcc
ttccgcgacctgtacgccgagctgcgcctctactaccgcggcgccaacctgcacctggag
gagacgctggccgagttctgggcccgcctgctcgagcgcctcttccggcagctgcacccg
cagctgctgctgcccgacgactacctggactgcctgggcaagcaggccgagccgctgcgg
cccttcggggaggccccccgcgagctgcgcctgcgcgccacccgcgccttcgtggcggcg
cgcgccttcgtgcagggcctgggcgtggctagcgacgtggtgcggaaggtggcccaggtg
cccctgagcccggagtgctcacgggccgtcatgaagctggtgtactgtgcccactgcctg
ggggtgcctggcgcccggccctgccccgactactgccgcaacgtgctcaagggctgcctg
gccaaccaggccgacctggacgccgagtggaggaaccttctggactccatggtgctcatc
acagacaagttctggggcccgacgggcgcagagagcgtcatcggcggcgtgcacttgtgg
ctggcagaggccatcagcgccctacaggacaacagcgacaccctcacagccaaggtcatc
cagggctgcgggaaccccaaggtgaacccccagggccccgagcccgaggagaagcggcgc
cggggcaagctggcgctgccggagaagccacccgcgggcacgcttcagaagctggtctcc
gaggccaaggcccagctccgagatgcccaggacttctggatcagcctcccggggacgctg
tgcagtgagaagttggccatgagcgcggccagcgatgaccgctgctggaatggggtggcc
aagggtcggtacctgcccgaggtgatgggcgacggcctggccaaccagatcaacaacccc
gaggtggaggtggacatcaccaagcccgacatggccatccgccagcagatcatgcagctg
aagatcacgaccaaccgtctgcgcggcgcctacaacggcaacgacgtggacttccaggac
gccagtgatgacggcagcggctcaggcagcggcgagggctgccccgacgacgagtgtggc
cggagggtcggcaggaagagctccagctcccggacgcccctgagccacgccctgcccggc
ctctccgagcgagagggtcagaaggcgtcggccacgggccgcccgcagccctgcacacgc
ctcctgctgctctccggcctcccgctggtgctctcagcagccaggccccggtggcggtaa
DBGET
integrated database retrieval system
