Globicephala melas (long-finned pilot whale): 115854651
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Entry
115854651 CDS
T11080
Symbol
PTRH1
Name
(RefSeq) LOW QUALITY PROTEIN: peptidyl-tRNA hydrolase
KO
K01056
peptidyl-tRNA hydrolase, PTH1 family [EC:
3.1.1.29
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
gmf03012
]
115854651 (PTRH1)
Enzymes [BR:
gmf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.29 peptidyl-tRNA hydrolase
115854651 (PTRH1)
Translation factors [BR:
gmf03012
]
Eukaryotic type
Release factors
115854651 (PTRH1)
Prokaryotic type
115854651 (PTRH1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Pept_tRNA_hydro
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
115854651
NCBI-ProteinID:
XP_060156702
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All DBs
Position
6:8421836..8423752
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AA seq
225 aa
AA seq
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MAVAAAIGRGLDDVRGRGLGHELGPHGAVWPLARRAVVESGHESVAGLGNPGLPGTRHSV
GMAVLGQLVRRLRVAESWARDRRCAADLAMASLGDAQLALLRPWRLMNVNGRSVAWATEL
FGLTAEEVCLVHDELHKPLGKLALKLGGSARGHSGVRSCISCLDSKAMPRLRVGIGRPTH
PDTVQGYVLSYFAPAEQELLPPLLSATDLLLDHIREXSQRPSSSP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggccgcgattggccgagggctggatgacgtcagggggcggggtctgggt
cacgaattggggccgcatggggctgtttggcctctcgcgcgcagggctgtggttgagtcg
ggccatgagtcggtggccggcctggggaaccctggactgcccggcacgcggcacagcgtg
ggcatggcggtgctggggcagctggtgcggcggctacgtgtggcggagagctgggcgcgc
gaccggcgctgtgccgccgacctcgccatggcctcgctcggggatgcccagctggccctt
ctccggccatggcggctcatgaacgtcaacgggcgcagcgtggcctgggccacggagctg
tttggactgactgctgaggaggtctgcctggtgcacgatgagctccacaagccgctgggg
aaactggctctgaagttgggaggaagtgccaggggccacagtggagtccgttcctgtatt
agctgcctcgactctaaggcaatgccacggctgcgggtgggcatcgggcgcccgacacac
ccagacacagtgcagggctacgtgctgagctacttcgcccctgctgagcaggagctgctg
cctccattgctgagcgccaccgacctgctcctggaccacatccgtgagtgaagccagagg
ccttcgtccagcccctga
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