Globicephala melas (long-finned pilot whale): 115854992
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Entry
115854992 CDS
T11080
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmf03036
]
115854992 (CHD7)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115854992 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
HTH_Hrp3
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
115854992
NCBI-ProteinID:
XP_030715541
LinkDB
All DBs
Position
17:7605165..7784392
Genome browser
AA seq
3040 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLESLGECGYPENPVNPMGQQMPIDQGFASLQPSLHHPSAN
QNQTKLTHFDHYNQYEQQKMHLMDQPNRMMSNAPGNGLASPHSQYHTPPVPQVPHGAGGG
GGGGGGGSGGGGGGQMGVYPGLPNERHGGQSFVDGGSMWAPRAVQVPDQIRAPYQPPPPQ
PQAAPSGPPAQGHPPHLQQLGGYLARGDFSMQQHGQPQPRMGQFPPGQEGLGQGSPFIAG
PGHLSHVPPQSPGVAPSLRHAVQPFHHHPPAALHGEPVAHSPRFSPNPPPQGAVRPQTLT
FSSRSQTVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAV
GFPSNSGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPP
QVRPGSAGIPMEVGSYPNMPHPQPSHQPPGAMGIGQRNMGPRNMQPSRPFMGMSPAPREL
AGHLRANGCPGVGLTDPQAIQDRLLPGQQHPGQPPAFQQLPSCPPLQPHPGLHHQASPPP
SHHQPWAQLHPSPQSAPQKVPVPQHSPSEPFLEKPVPDMTQVSGPNAQLVNSDDYLLSVE
QQPQQKKKKKKNNHIVAEDPSKSFGKDDFPGGVDNQELNRNSLDGSQEEKKKKKRPKAKK
DPKEPKEPKEKKEPKEPKTPKAPKIPKEPKEKKAKTATPKPKSSKKSSNKKPDSEASALK
KKANKGKTEGSENSDLDKTPPSSPPPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDEE
ADDADAAGRDSPSTTSQSEPQESVDADGPVVEKIMSSRSVKKQKESGEEVEVEEFYVKYK
NFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVDRIMDFA
RSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDIDQAKIEEFEKLLSREPETERVERPPAD
DWKKSESSREYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIY
LKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVI
KGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKLMDLEHKVL
LTGTPLQNTVEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLK
EDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKC
CNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLI
FSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL
GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLK
LGLDKAVLQSMSGRENAPNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQIL
LRRTHTITIESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNL
VIDTPRVRKQTRLYSAVKEDELMEFSDLESDSEEKPSTKPRRPQDRSQGYARSECFRVEK
NLLVYGWGRWTDILSHGRYKRPLSEQDVETICRTILVYCLNHYRGDENIKSFIWDLITPT
ADGQTRALVNHSGLSAPVPRGRKGKKVKAQSSHPVVQDADWLAGCNPDALFQEDSYKKHL
KHHCNKVLLRVRMLYYLRQEVIGDQAEKILEGADSSEADVWIPEPFHAEVPTDWWDKEAD
KSLLIGVFKHGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDRE
DEDPEYKPTRTPFKDEIDEFANSPPEDKEEPMEIRGPGKHSEGSAELGQLYWPNTSTLTT
RLRRLITAYQRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREE
ADFYRVVSTFGVIFDPAKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRVPAK
PDGGRFAGHGTAGRGRGGRPRVTRAPPAAEPPDLPSAIEPITEERASRTLYRIELLRKIR
EQVLRHPQLAERLRLCQPSLDLPEWWECGRHDRDLLVGAAKHGVSRTDYHILNDPELSFL
DAHKTFAQTRGAAGAPALSALALGFGQTPAAAATAAPTAAPGQEEKAGGAEAKAGEAGEA
EAEEEEAEGGGKDRKQDREAEAEPGAGKSDPRGAEVGADMGPKSISEKGSEEDEEEKLED
DDKSEESSQPEAGTVSRGKNFDEESNASMSTARDETRDGFYMEDGDPSVAQLLHERTFAF
SFWPKDRVMINRLDNICEAVLKGKWPVNRRQVFDFQGLIPGYTPPTADSPLQKRSLAELS
MVGQASISGSEDLTASPQLSKEDALNLSVPRQRRRRRRKIEIEAERAAKRRNLMEMVAQL
RGNQVVSENGQEKVVDLSKASREAASSTSNFSSLTSKFILPNVSAPMSDAFKTQMELLQA
GLSRTPARHLLNGSLVDGEPPMKRRRGRRKNVEGLDLLFMSHKRTSLSAEDAEVTKAFEE
DIETPPTRNIPSPGQLDPDTRIPVINLEDGTRLVGEEAPKNKDLVEWLKLHPAYTVDMPS
YVPKNADVLFSSFQKPKQKRHRCRNPNKLDINTLTGEERVPVVNKRNGKKMGGAMAPPMK
DLPRWLEENPEFAVAPDWTDIVKQSGFVPESMFDRLLTGPVVRGEGASRRGRRPKSEIAR
AAAAAVASTSGINPLLVNSLFAGMDLTSLQSLQNLQSLQLAGLMGFPPGLATATAAAAAA
GGDTKNPAAVLPLVLPGVAGLPSMFGLGGLLNTPLSAAAAAAAAAAAGNTAAAAGPAEPE
DGACKAEEKGNENEDENKDSEKSTDAVPGPDSANGSVGAATAPAGLPSNPLAFNPFLLST
MAPGLFYPSMFLPPGLGGLTLPGFPALAGLQNAVGSGDDKAPDKAEGGTFQEEETLEGSD
AEESLDKTAESSVLEDEIAQGEELDSLDGGDEIENNENDG
NT seq
9123 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaggaatgatgagtcttttcggcgaggacgggaatattttcagcgaaggc
ctcgaaagcctgggagaatgtggttaccctgaaaatcccgtgaatcccatgggtcaacag
atgccgatagaccaaggctttgcctccttacagccgtccctccaccatccctccgcgaat
cagaatcaaaccaagttgacccacttcgatcactataatcagtacgagcagcaaaagatg
catctgatggaccagccgaacagaatgatgagcaatgcccctgggaacggactggcgtct
ccccactcgcagtaccacaccccgcccgtcccccaggtcccccacggggctggcggcggt
ggtggcggcggcggcggtggcagcggcggcggcggcggcggccagatgggtgtctacccc
ggcctgccgaacgagcggcatggggggcagtctttcgtggacggcggctccatgtgggct
ccccgggccgtgcaggtgccggaccagatccgagccccctaccagccgccaccgccacag
ccccaggcggccccgtcggggccccccgcgcagggtcaccccccgcatctgcagcagctg
ggcggctacctggcgcgcggggacttctccatgcagcagcacgggcagccgcagccgagg
atgggccagtttcccccgggccaggagggcctcggtcagggaagccccttcatcgccggc
cccggccacctgtcgcacgtgcccccgcagagccccggggtggcgccgagcctgcgccac
gcggtgcagcccttccaccaccatccccccgccgctctccacggggagcccgtagcccac
agcccccggttctcccccaaccctcccccgcaaggggccgtgaggccgcagaccctcacc
tttagttctcggagccagaccgtcccctcacctactataaacaactcagggcagtattct
cgctatccttacagtaacctaaatcagggattagttaacaatacagggatgaatcagaat
ctaggccttacaaataatactccaatgaaccagtccgtcccaagataccccaacgctgta
ggattcccatcgaacagtggccaaggactcatgcaccagcagcctatccaccccagcggc
tcccttaaccaaatgaacacgcaaactatgcacccttcgcagcctcagggaacttacgcc
tctccgcctcccatgtcacccatgaaagcaatgagtaacccggcgggcacccctcctccg
caagtccggcccggaagtgccgggatcccgatggaagtcggcagttacccaaatatgcct
cacccgcagccatctcaccagccccctggcgccatggggatcggacagaggaacatgggc
cccaggaacatgcaaccgtcccgtccgtttatgggcatgtccccggcgccgagggagctg
gctgggcacctgagagccaacggttgtcccggcgtcggcctcacagacccgcaggcgatc
caggaccggctgctccctggccagcagcaccccgggcagccgccggccttccagcagttg
ccaagctgccctccgctgcagccccatccgggcctgcaccaccaggcttcgcccccgccc
tcgcaccaccagccttgggcacagctccacccctcgccccagagcgccccgcagaaagtg
cctgtgccgcagcattctccatcggagccctttctagagaaaccagtgccggatatgact
caggttagtggaccgaacgctcagctagtgaacagtgatgattacctgctgtccgtagaa
cagcagccgcagcagaagaagaagaaaaagaaaaacaaccacattgttgcagaggatccc
agtaaaagtttcggtaaagatgacttccctggtggggttgataaccaagaactaaacagg
aactcactggatgggtcccaagaagagaaaaagaaaaagaaaaggccgaaggcaaaaaaa
gatcccaaggaaccgaaagaacccaaggagaagaaagagcccaaggaacccaagaccccg
aaagcccctaagattcccaaagagccaaaggaaaagaaagcaaaaactgccacgccaaaa
cccaaatccagcaaaaagtcaagtaataagaaacctgattcagaagcaagtgctttgaag
aaaaaggccaacaagggaaaaacagaaggttctgagaattcagacttagacaaaacaccc
ccatcatctcctcctcctgaagaagacgaggacccaggtgttcagaagagacggtccagc
aggcaggtgaagagaaagcggtacaccgaggacttggagttcaagatctccgacgaggag
gccgatgacgcagacgctgctgggagagactcgccctccacaacctcgcagtcggagccg
caggaatctgttgatgcagacggtccagtggtagaaaaaattatgagtagtcgttcagta
aaaaaacagaaggaatctggagaagaggtagaagttgaggagttctacgtgaaatacaaa
aacttctcttatcttcattgtcaatgggcatctgtagaagatctggaaaaagataagaga
attcagcaaaagattaaacgatttaaggcaaagcagggccagaacaaattcctttcagag
attgaagatgagctttttaatccagattacgtggaggttgaccggataatggactttgca
cgtagcacagatgaccggggagagcccgtgactcactacctggtgaagtggtgctcactg
ccttatgaagacagcacgtgggagctgaggcaggacatagaccaagccaagatcgaagag
tttgagaagctgctgtcccgggagccggaaacagagcgcgtggagcgacctcctgctgat
gactggaagaaatcggagagttccagggagtataaaaacaataacaaactcagggaatac
cagttggagggagtaaactggctacttttcaattggtacaacatgcgaaactgcatttta
gcagatgaaatgggtttgggaaaaactatccagtccattacatttctctatgagatatat
ttgaaaggaatccatggcccttttttagtaattgccccattgtccacaatccccaactgg
gaaagggaattccggacctggacagagttgaacgtggttgtgtatcatgggagtcaagct
agtcgtcggaccattcagttgtatgaaatgtacttcaaagatccccagggtcgagtgata
aaggggtcctataagtttcatgccatcatcactacgtttgagatgattctgaccgattgt
cctgagctgcggaatattccctggcgctgcgtggtcattgatgaagcccacaggctgaag
aatcggaactgcaagctgttggagggactcaagctgatggacttggaacacaaagtgctg
ctgacagggaccccgctccagaacaccgtggaagagctcttcagcttgcttcacttcctg
gaaccaggtcgattcccttcggaaaccacctttatgcaagaattcggtgatctgaaaacc
gaagaacaggtgcaaaaactccaggctattctaaagccaatgatgttgagacgtctcaaa
gaggacgtggaaaagaacttggcccccaaggaagaaacgatcatcgaagtcgagctaaca
aacattcagaagaaatattaccgagccatccttgagaagaattttacgtttctttccaaa
ggtggtggtcaagctaacgtacccaaccttttaaacactatgatggaattacggaagtgc
tgcaatcatccctaccttattaacggtgctgaagagaagattttggaagagtttaaagaa
acacacaatgccgactctccagattttcagctccaggcgatgatccaggctgctgggaag
ctcgtgctgattgacaagctgctgccgaagctgaaggccggcggccacagggtgctcatc
ttctcccagatggtgcgctgcctggacatcctggaagactacctcattcagagacggtac
ccgtacgaaaggattgacggccgggtcagagggaacctccgccaggcagctatcgacagg
ttctccaaacctgactctgataggtttgttttcctcctgtgtacaagggcaggaggttta
ggcattaatcttactgctgctgatacctgcatcatctttgattccgactggaatccccaa
aatgatctccaggctcaggctagatgtcacagaataggacagagcaaatctgtgaaaatc
tacaggctgattacaaggaattcttacgagagggagatgttcgacaaagctagcttgaag
ctcggtctggataaagctgtcctgcagtccatgagcggaagagaaaacgctcccaacggg
gtacagcagctttccaagaaagaaatagaggatcttctccggaaaggggcctatggtgcc
ctcatggatgaggaggacgaagggtctaaattctgcgaagaagatatcgaccagattctc
ctccggcgaacccacaccatcaccatcgagtctgagggaaagggttccacgtttgctaag
gccagttttgttgcatctggaaacaggacagatatttccttggatgatccaaatttctgg
caaaagtgggctaagaaggcggaattggatatcgatgccttaaatgggaggaacaacctg
gttattgacactccaagagtgaggaagcaaaccaggctgtacagtgcagtgaaggaggat
gagctgatggaattttcagacctggagagcgattctgaagagaagcccagcacgaagcca
cggcggccgcaggacaggtcccagggctatgccaggagcgagtgcttccgagtagagaag
aacctgcttgtctacggctgggggcgctggacagacatcctttcccatggccgctacaag
cgtccgctcagcgagcaggacgtggaaaccatctgcaggactatcctcgtgtactgcctc
aaccactaccggggggacgagaacatcaagagcttcatctgggatctgatcacgcccacg
gccgatggccagacgcgagccctggtcaaccattccggtttatcagccccggtgcccagg
gggcggaagggcaaaaaggtgaaagcccagagctcgcatccagtggtgcaggacgctgac
tggctggccggctgcaacccagatgccctgttccaggaggacagctacaagaagcacctg
aagcaccactgcaacaaggtcctgctgcgtgtccgcatgctgtactacctgagacaagaa
gtgataggagaccaggcggagaagatcctagagggcgccgactcaagtgaagctgatgtg
tggatacctgagcctttccacgcggaagtccccacagattggtgggataaggaagctgat
aagtccctcctgattggagtgttcaagcacgggtacgagaagtacaattccatgcgagct
gaccccgcgctgtgcttcctggaacgagttggtatgcccgatgccaaggccatcgctgcc
gagcagagaggaacagacatgctagcagatggcggtgatgggggagaatttgatagagaa
gatgaagacccagaatataaaccaaccagaacgccgttcaaggatgaaatagatgaattt
gcaaattctcctccagaagataaggaagaacccatggaaatacgcggcccaggcaagcac
agcgagggcagcgctgagttaggccagctgtactggcccaatacctcgaccctgaccacc
cgtctgcgcaggctcattaccgcctatcagcgcagctataaaaggcagcagatgaggcag
gaggccctgatgaagaccgaccggcggagacggcggccccgggaggaagtgcgggccctg
gaagctgaaagggaggctataatatcggagaaacggcagaagtggacgagacgggaagag
gcggacttttaccgcgtggtgtccacgtttggggttatttttgacccggcgaaacagcag
ttcgactggaaccaattccgagcctttgccaggcttgacaagaagtccgatgagagtctg
gagaagtacttcagctgcttcgtggccatgtgccggcgggtgtgtcgcgtgcccgccaag
ccagatggcggtaggttcgccgggcacggaacagcggggcgtgggaggggcgggcgccct
cgggtgacacgcgctccccctgccgcagagccgcccgacctgccctcggcgatcgagccc
atcacggaggagcgcgcctcgcgcaccctgtaccgcatcgagctgctgcggaagatccgc
gagcaggtgctgcgccacccgcagctggccgagcggctccggctctgccagcccagcctg
gacctgcccgagtggtgggagtgcggcaggcacgaccgggacctgctggtgggcgccgcc
aagcacggggtcagccgcacggactaccacatcctcaacgaccccgagctctccttcctg
gacgcgcacaaaaccttcgcccagacccgaggggcggccggcgccccggccctgagcgcg
ctggccctgggctttggccagacgcccgccgccgccgccaccgccgcccccaccgccgcc
ccgggccaggaggagaaggcgggaggggcggaggccaaggccggggaggcgggggaggcc
gaggcagaggaggaggaggccgagggcggcgggaaggaccggaagcaggaccgcgaggcc
gaggccgaacccggcgctgggaagagcgatccgagaggggcggaggtcggtgcggacatg
gggcccaagtccatttcagaaaagggttccgaggaggacgaagaggaaaagctggaggac
gatgacaagtcggaagagtcttcccagcccgaagcaggaactgtctcgagagggaagaat
tttgatgaagagagcaatgcttccatgagcactgctagggatgagacccgagacggattc
tacatggaggatggagatccgtccgtagctcagctccttcatgaaagaacgtttgccttc
tcgttttggcctaaggatcgagtaatgataaaccgattagacaacatctgtgaagcagtg
ttgaaaggcaaatggccggtaaataggcgccaggtgtttgatttccagggcctcatcccc
ggctacacgccccccactgctgacagtcccctgcagaagaggagcctggccgagctctcc
atggtgggccaggcgagcatcagcggcagcgaggacctcaccgcttcccctcagttgtcc
aaggaagacgccctcaacctctccgtccctcgccagaggaggaggaggaggaggaagatc
gaaatcgaggccgaaagagctgctaagcggcgaaacctcatggagatggttgcccagctg
cgggggaatcaggtggtctcggaaaacggacaggagaaagttgtcgatttatcaaaggcc
tcgagagaggcagcaagctctacctcaaatttttcatctcttacttcaaagtttatcttg
cctaatgtctcggcgcccatgtctgatgcctttaagactcaaatggagctgctccaggca
ggcctgtcccgcacgcccgccaggcatctgctcaacggctccctcgtggacggagagcct
cccatgaagaggaggcggggaaggaggaaaaacgtggagggcctcgacctgctgttcatg
agccacaaacggacgtcattgagtgcagaggatgctgaggtgaccaaagcttttgaagaa
gatatagagaccccacctacaagaaacattccttctcctggacagctggacccagacacg
cggatccctgttataaatctcgaagatgggactcggctggtgggggaagaagctcctaaa
aataaggacttagtcgaatggctgaagctgcatcccgcttacactgttgatatgccaagt
tacgtaccaaagaatgcagatgtgctgttttcctcatttcagaaaccgaaacagaaacga
cacagatgtcgaaaccctaataaattggatataaacactttgacaggagaagaaagggtg
cctgttgtcaataaacgaaatgggaagaagatgggtggagctatggcgcctcccatgaag
gatctaccccggtggctggaagaaaaccccgagtttgcagttgccccagactggaccgat
atagtcaagcagtctggtttcgttcctgagtcgatgtttgaccgtcttctcaccggaccc
gtggtgcggggagaaggggcgagccggcggggacggaggcccaaaagtgaaatcgcccgc
gccgccgccgccgccgtggcctccacgtcgggcatcaaccccctgctggtgaacagcctg
ttcgctgggatggacctgacgagcctgcagagcctccagaacctccagtctctgcagctg
gctggcctcatgggcttccctccgggcctggccacggccacagccgctgccgccgccgcc
ggaggagacaccaagaacccggccgccgtgctgcccctggtgctgccgggcgtggccggc
ctgcccagcatgttcgggctgggcgggctgctcaacaccccgctgtccgccgccgccgcc
gcagccgcagctgccgccgccggcaacaccgcggccgcggccggccccgcggagccggaa
gacggcgcgtgcaaagcggaggagaagggcaacgagaacgaggacgagaacaaggactcg
gagaaaagcacagacgccgttccgggcccggactctgcgaatggatctgttggtgctgct
actgccccggccggcctgccctccaacccgctcgccttcaaccccttcctcctgtccacc
atggccccgggcctcttctacccgtccatgtttctacctccgggactggggggattgacg
ctgccgggcttccccgccttggcgggactgcagaacgccgtgggctccggcgacgacaag
gctcccgacaaggctgaggggggcacctttcaggaagaggagaccctcgagggcagcgac
gccgaggagagcctggacaagacggcggagtcctcagtcttagaagacgagatagcacag
ggcgaagagctagactcactcgacgggggggacgaaatagaaaacaatgaaaatgatgga
taa
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integrated database retrieval system
