Globicephala melas (long-finned pilot whale): 115855131
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Entry
115855131 CDS
T11080
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03030
DNA replication
gmf03410
Base excision repair
gmf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115855131 (POLE)
03410 Base excision repair
115855131 (POLE)
03420 Nucleotide excision repair
115855131 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmf03032
]
115855131 (POLE)
03400 DNA repair and recombination proteins [BR:
gmf03400
]
115855131 (POLE)
Enzymes [BR:
gmf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
115855131 (POLE)
DNA replication proteins [BR:
gmf03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
115855131 (POLE)
DNA repair and recombination proteins [BR:
gmf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
115855131 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
115855131
NCBI-ProteinID:
XP_030715740
LinkDB
All DBs
Position
13:complement(89280852..89335890)
Genome browser
AA seq
2283 aa
AA seq
DB search
MVLRNSGRRRAEPGSDGEASRDDGPSTSVSALKRLERSQWTDKMDLRFGFERLKEPGEKT
GWLINMHPTEILDEDKRLVSAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFL
SKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDLVKVRKEISPAVKKNREQ
GHTSDAYTAMLTSVLQGGSVITDEEEASKKISDQLDNIVDMREYDVPYHIRLSIDLKIHV
AHWYNIRYRGSAFPVEIARRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGYLITNREIVSEDIEDFEFTPKPEYEGPFYVFNAPDEVHLIQRWFEHIQETKPNIMV
TYNGDFFDWPFVEARAAVHGLSMYQEVGFQKDSQGEYKAPQCIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEPEFSKLTDDGHVLDAETYV
GGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMRHAIEEEEKVPMEQVTNFQEVC
DQIKAKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLTPEGPARAFHELSREEQAKYEK
RRLADYCRKAYKKIHVTKVEERLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWRKKLS
AAVEVGEAAEAKRCRNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTSVKRPKVTISYPGAMLNIM
VKEGFTNEQYQELAEPSSLTYVSRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEAYGSVAKVADYWLDVLYSK
AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTARRLAEFLGDQMVKDAGLSCRYII
SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSA
IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVYKQKKISELFVLEGKRQVGVAQA
SEGAQSLGAPDMEDFGLVKPLHSAVPVATKRRRSHWESQEESQDLELTVPWQEILGQPPG
LGSTQEEWLVWLQFHKKKWQLQARQRLAHKKRRRLAGPEGAPRPRTVREGPSRGLGGFLR
RTARSILDLPWQIVQISETGQAGLFRLWAVISSDLYCIKLNIPRVFYVNQRVAKAEEGPS
YRKVNRVLPRSNVVYNLYEYSVPEDMYQEHINEINTELAAPDIEGVYETQVPLLFRALVQ
LGCVCVVNKQLVRHHSGWEAETFALEHLEMRSLAQFSYLEPGSIRHIYLYHHAQGHKALF
GIFVPAQRKASVFVLDTVRSNQMPSLSALYSAEHSLLLEKVGPELLPPSKHTFEVRAETD
LKVICRAIQRFLLAYKEERRGPTLIAVQSNWELKRLAGEVPVLEEFPLVPVRVADKVNYG
VLDWQRHGARRMIRHYLNLDTCLSQAFEMSRYFHIPVGNLPEDISTFGSDLFFARHLQRH
NHLLWLSSTSRPDLGGKEADDNRLVVEFDDRAPVEVNSSGCYSTVCVELDIQNLAVNTIL
QSHHVNDMEGANSMGISFDVIQQASLEDMITGNQAASAPTSYDETALCSSTFRILKSMVV
GWVKEITQYRNIYADNQVVHFYRWLRSPSSLLHDPTLHRTLHSMMKKLFLQLIAEFKRLG
SSVVYANFNRIILCTKKRRVEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLLWMDPS
NYGGIKGNVPSSIHCGQQDSPEEGRAEGEEPEEEPEEGEEEGGAQEPDVEDLLENSWNIL
QFLPQAASCQSYFLMIVSAYIVAVYHSMKEELRRSAPGSTPVRRRGASQLSQEAQGEAGA
LPGMITFSQDYVANELTQNFFTITQKIQKKVTGSRNSTELSEMFPVLPGSHLLLNNPALE
FIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVLPEVICRSCNF
CRDLDLCKEPSFSQDGSVLPQWLCSNCQVAYDSSVIEMALVEALQKKLMAFTLQDLICLK
CRGVKETNMATYCSCAGAFSLTIHTKVFMEQIRTFQNIAQHYGMSYLMETLEWLLQQNPQ
LGH
NT seq
6852 nt
NT seq
+upstream
nt +downstream
nt
atggttctgaggaacagcgggcggcggcgcgcggagccgggctcggacggcgaggccagc
cgggacgatggcccctctacctctgtctcggcactcaagcgcctggagcgcagtcaatgg
acagataagatggatctgcggtttggttttgagagactcaaggagcctggtgagaagaca
ggctggcttatcaacatgcaccctacggagattttagatgaagataaacgcttggttagt
gcagtggattactactttattcaagatgatgggagccgatttaaggtggccttgccctat
aagccatatttctacattgcaaccagaaagggttgtgagcgagaagtttcgtcttttctc
tctaagaagtttcagggtaaaatcgctaaagtagagactgtccctaaagaggatctggac
ttgccaaatcacttggttgggttgaaacgaaattacattaagctgtccttcaacaccgtg
gaggaccttgtcaaagtgaggaaggagatctcccctgctgtgaagaaaaaccgggaacag
ggccacaccagtgatgcctatacggctatgctcaccagtgttctacaagggggcagtgtg
attactgacgaagaggaagcctctaagaagatttctgaccaattggacaacattgtggac
atgcgagagtacgatgtgccctaccacatccgcctctccattgacctgaagatccatgtg
gctcactggtacaacatccggtaccgaggaagtgcctttccagtggaaattgcccgccgc
gatgaccttgttgaacgacccgaccctgtggttttagcatttgacattgagacgaccaaa
ctgcccctcaagtttcccgatgctgagactgatcagattatgatgatttcctatatgatt
gacggtcagggctacctcatcaccaacagggagatcgtctcagaagatatagaagatttc
gagttcacccccaagccagaatatgaagggcccttctatgtcttcaatgcgcctgatgag
gttcatctaatccaaagatggttcgaacacatccaggagaccaaacccaacatcatggtc
acctataatggggacttttttgactggccgtttgtggaggccagagcagcggtccatgga
ctgagcatgtaccaggaggttgggttccagaaggacagccagggggagtacaaagcaccc
cagtgcatccacatggactgtctcaggtgggtgaagagggacagttatcttcccgtgggc
agccacaacctcaaagcagctgccaaagccaagctgggctatgaccccgtggagctggac
cccgaggacatgtgccggatggccactgagcagccccagacgctggccacctactcggtg
tcagacgcagtggccacatactacctgtacatgaagtacgtccacccctttatattcgcc
ctgtgcaccattatccccatggagcccgatgaggtgctgcggaagggctccgggacgctg
tgtgaggccttgctgatggtacaggccttccacgccaacatcgtcttccccaacaagcag
gagccagagttcagcaagctgacagatgatggccacgtgctggatgccgagacctacgtg
ggtggccacgtggaagccctggagtcgggcgtgttccgcagcgatatcccctgccggttc
cggatgaatcctgctgcctttgacttcctgctgcagcgggtggagaagaccatgcgtcac
gccatcgaggaagaggagaaggtgcccatggagcaggtcaccaacttccaagaggtgtgt
gatcagattaaggccaagctcacctccctgaaagatgttcctaaccgaattgagtgtccc
cttatctaccacctggacgtgggggccatgtaccccaacatcatcttgacgaaccgcctg
cagccctctgccatggtggatgaggccacctgtgctgcctgtgacttcaacaagcctgga
gcaaactgccagaggaagatggcctggcagtggaggggcgagttcatgccagccagtcgc
agcgagtatcatcggatccagcaccagctggagtcagagaagttccctcccttgacccca
gagggcccagcccgggcctttcacgagctgtcccgcgaggagcaggctaaatacgagaag
cggaggctggcagattactgccggaaggcatacaagaaaatccacgtgaccaaggtggaa
gaacgtcttaccaccatctgccagcgggagaactccttctatgtggacacagtgcgtgcc
tttcgggacaggcgctacgagttcaaaggtctccacaaggtgtggagaaagaagctatct
gcggcggtggaggtgggagaggcagcggaagcaaagcgctgcaggaacatggaggtcctg
tacgactccctgcagctggctcacaagtgcatcctcaactccttctacggctacgtcatg
cgcaagggggcccgctggtactcaatggagatggctggcatcgtctgcttcacgggggcc
aacattatcacccaggcacgggagctgattgagcagattgggaggcccttagagctggac
acagatggaatatggtgtgtcctgcccaacagcttcccggaaaactttgtcatcaagacg
accagtgtgaaaaggcccaaggtgaccatctcctaccctggggctatgctaaacatcatg
gtcaaggaaggcttcaccaatgagcagtaccaggagctggctgagccttcctcgctcacc
tatgtctcccgctcagagaacagcatcttttttgaggttgacggaccctaccttgccatg
atccttccagcctccaaggaagaaggcaagaagctgaagaagaggtatgccgtattcaat
gaggatggttccctggctgagctcaagggcttcgaggtcaaacgccgtggggagctgcag
ctgattaaaatcttccagtcctcagtattcgaggccttccttaagggcagcaccctagag
gaggcgtatggctctgttgccaaggtggccgattactggctggacgtgctgtacagcaag
gcagctaacatgcctgattccgagctgttcgagctgatctctgagaaccgttccatgtct
cggaagctggaagattatggggagcagaagtctacgtccatcagcacggccaggcgcctg
gctgagttcctgggggatcagatggtgaaggatgcagggctgagctgccgctacatcatc
tcccggaagcctgaggggtctccggtcacagagagggccattccactcgccattttccag
gcagagcccacggtgaggaagcactttctccggaaatggcttaagagttcttcccttcaa
gactttgatattcggacaattctggactgggactactacatcgagcgactggggagtgcc
atacagaagatcatcacaatccctgcggctctgcagcaggtgaagaacccagtaccacgt
gtcaagcaccctgactggctgcacaaaaaactgctggagaagaacgatgtctacaagcag
aagaagatcagtgagctcttcgtccttgagggcaagagacaggtgggcgtggcacaagct
tcagaaggtgcccagagccttggcgcccccgacatggaggacttcggccttgtgaagccg
ctgcactcggcagtgcccgttgctaccaagaggaggcgtagccactgggagagccaggag
gagtcgcaggacctggagctgacggtgccctggcaggagatcttggggcagcctccgggg
cttggatccacccaggaagagtggctggtctggctccagttccacaagaagaagtggcag
ctacaggctcgacagcgcctcgctcacaagaagaggcggcgtctggcggggccagaaggt
gcaccgaggcctaggaccgtccgagaggggccctccagagggctggggggcttcttgcga
agaactgctcgcagcattctggacctcccgtggcagatcgtgcaaatcagcgagaccggc
caggctggcttgttcaggctgtgggctgtcatcagcagtgacctgtattgcatcaagctg
aacattccccgggtattctacgtgaaccagcgggtggccaaagcggaggagggcccttcc
tatcggaaggtgaatcgggtccttcctcgctccaacgtggtctacaatctctatgagtac
tcggtgccagaggacatgtaccaagagcacatcaacgagatcaacactgagctggcggcg
ccggacatcgagggcgtgtacgagactcaggttccgttattgtttcgggccctggtgcag
ctgggctgtgtgtgtgtggtcaataaacagttggtgaggcatcactcaggctgggaagca
gaaaccttcgctcttgagcacctggagatgcgctctctggcccagttcagctacctggaa
ccagggagcatccgccacatctacctgtatcaccacgcgcagggccacaaagctctcttc
ggcatcttcgtgcccgcacagcgcaaggcgtctgtgtttgtgttggataccgtgcgaagc
aaccagatgcccagcctcagtgccctgtactcagccgagcacagccttctgctggagaaa
gtgggccctgagctcctgccccccagcaaacacacttttgaagttcgggctgaaacagac
ttgaaggtcatctgcagagccatccagcgcttcctgctggcctacaaagaggagcgccgt
gggcccacactcatcgctgttcagtccaactgggagctgaagaggctggctggcgaagtg
cccgtcttggaggagttcccgctagtgcctgtccgtgtggctgataaggtcaactacggg
gtcctggattggcagcgccacggagcccggcgcatgatccggcactacctcaacctggac
acttgtctgtcacaggccttcgagatgagcaggtacttccacatccccgttgggaatctg
ccagaggacatctctacgtttggctccgacctcttctttgcccgccatctccagcgccac
aaccacctgctctggctgtcttccacatcacggcctgacctgggcgggaaggaggctgat
gacaaccgccttgtcgtggagttcgatgaccgagcccctgtggaggtcaacagttcaggc
tgttactccacagtgtgcgtggagctggacattcagaacctggctgtcaacaccatcctg
caatctcaccatgtcaatgacatggagggggccaacagcatgggcatcagcttcgatgtg
atccagcaggcctccctggaggacatgatcacgggcaatcaggctgccagcgctcccacc
agctacgacgagacggccctctgctccagcaccttcaggatcctgaagagcatggtggtg
ggctgggtgaaggagatcacgcagtaccgcaacatctacgccgacaaccaggtggtgcac
ttctaccgctggctccggtccccgtcctcgctgcttcacgaccccaccctgcaccgcaca
ctgcacagcatgatgaagaagctcttcttgcagctcattgctgagttcaagcgcctgggg
tcatcagtcgtgtatgccaacttcaaccgcatcatcctgtgcaccaagaagcggcgggtg
gaggatgcccttgcctacgtggagtacatcaccaacagcatccattctaaagagatcttc
cattctttgacaatttctttctctcgatgctgggaatttcttctctggatggatccctct
aactatggtggaatcaaaggaaatgttccatctagtattcactgtggacagcaagactcc
cccgaagagggcagagcggagggggaggagcctgaggaggaacctgaggagggagaggag
gagggaggtgcacaggagccggatgtcgaggacctgctggaaaacagctggaacatcctg
cagttcctgccgcaggcagcctcctgccagagctacttcctcatgatcgtttcagcgtac
atcgtggctgtgtaccacagcatgaaggaggagctgaggcgcagcgccccgggcagcacc
cctgtgaggaggaggggggccagccagctctcccaggaggcccagggagaggccggagcc
cttccaggaatgatcaccttctcacaagattatgtggcgaacgaactcactcagaacttc
ttcaccatcacacagaagattcagaagaaagtcacaggctctcggaactcgactgagctc
tcagaaatgtttcctgtcctccccggttctcacctcctcctcaataaccccgctctggag
ttcatcaaatatgtgtgcaaggtcctgtctctggacacgaacatcacaaaccaggtgaac
aagctaaaccgagacctgcttcgcctggtagatgtcggcgagttctcggaggaggcccag
ttccgagacccctgccgctcctacgtgctccctgaggtcatctgccgcagctgtaacttc
tgccgggacctggacctgtgcaaagagccctccttctctcaggatgggtctgtgctgcct
cagtggctctgctccaactgtcaggtagcctacgactcatcagtcattgagatggccctg
gtggaagccctgcagaagaaactgatggccttcaccctgcaggacctgatctgcctgaag
tgccggggtgtgaaggagaccaacatggccacgtactgtagctgtgccggggccttctcc
ctcaccatccacaccaaggtcttcatggagcagatcagaaccttccagaacattgcccag
cactatggcatgtcgtacctcatggagaccctggagtggctgctgcagcagaacccccag
ctgggacattag
DBGET
integrated database retrieval system
