Globicephala melas (long-finned pilot whale): 115855150
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Entry
115855150 CDS
T11080
Symbol
PUS1
Name
(RefSeq) pseudouridylate synthase 1 homolog isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmf03016
]
115855150 (PUS1)
Enzymes [BR:
gmf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
115855150 (PUS1)
Transfer RNA biogenesis [BR:
gmf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
115855150 (PUS1)
Prokaryotic type
115855150 (PUS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
115855150
NCBI-ProteinID:
XP_030715795
LinkDB
All DBs
Position
13:88773685..88785976
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AA seq
431 aa
AA seq
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MGLTSLRAAAWALRRACGPWTPRLGPRLLCLPPMAGNGEAPVPVGTKQEQDRKVRRGWQG
AARIWEETEQQAKRLRSSEGGGQHRKLPKRKVVLLVAYSGKGYHGMQRNVGSSKFKTIED
DLVSALVRSGCIPENHGEDMRKMSFQRCARTDKGVSAAGQVVSLKVWLIDDLLEKINSHL
PSHIRILGLKRVTGGFNSKNKCDARTYFYMLPTFAFAHKDHDAQDETYRLHAETLGHVNR
LLACYRGTHNFHNFTSQKGPREPSARRYILDMFCEEPFVREGMEFAVIKVKGQSFMTHQI
RKMVGLVVAIVKGYAPESVLERCWGEAKVDVPKAPGLGLVLERVHFEKYNQRFGHDGLHE
PLDWAREEADVTAFKEQHIYPTIIGTERHERSMAQWLSTLPMHDFSATAHAAAGPGAKVP
RPLEGSDGDSD
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggggctcaccagcctgcgggcggcggcctgggccctgaggagagcctgcggaccgtgg
accccgcgcctgggaccgcgcctcctctgtttgccccccatggcagggaatggggaggcc
cccgtgcccgtggggaccaagcaggagcaggacaggaaggtccggcgtggctggcagggc
gcggccaggatctgggaggagacagagcagcaggcgaaaaggctcaggagcagcgagggt
ggagggcagcacaggaagctgcccaagcgcaaggtcgtgctgctcgtggcctattccggg
aagggctaccacggcatgcagaggaatgttgggtcctcgaaattcaagaccatcgaagat
gacctggtgtctgccctggtccggtcgggttgtattccggagaatcacggggaggacatg
cggaagatgtccttccagcgctgcgcccggacggacaagggtgtgtctgcggccggccag
gttgtgtccctgaaggtgtggctgattgacgaccttttagaaaagattaacagccacctt
ccgtctcacattcggatactgggactgaagagggtcacgggcggcttcaactccaagaac
aagtgcgacgccaggacctacttctacatgctgcccacgttcgcctttgcccacaaggac
cacgacgcgcaggacgagacgtaccggctgcacgcagagacgctggggcatgtgaaccgg
ctcctggcctgctacaggggcacccacaacttccacaacttcacctcgcagaaggggccc
cgcgagcccagcgcccggcgctacatcctcgacatgttctgcgaggagcccttcgtgcgc
gaaggcatggagttcgcggtgatcaaggtcaagggccagagcttcatgacgcaccagatc
aggaagatggtggggctggtggtggccatcgtcaagggctacgcgcccgagagcgtgctg
gagcgctgctggggggaggccaaggtggacgtgcccaaggcaccggggctcggcctggtc
ctggagcgggtgcacttcgagaagtacaaccagcgcttcggccacgacgggctgcacgag
ccgctggactgggcgcgggaagaggctgacgtcacggccttcaaggagcagcacatctac
cccacgatcatcggcaccgagcgccacgagaggtccatggcccagtggctgagcaccctg
cccatgcatgacttcagcgccactgcccatgcagccgccggcccgggcgccaaggtcccc
cgccccctggaaggcagtgatggggacagtgactga
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