Globicephala melas (long-finned pilot whale): 115855441
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Entry
115855441 CDS
T11080
Symbol
XBP1
Name
(RefSeq) LOW QUALITY PROTEIN: X-box-binding protein 1
KO
K09027
X box-binding protein 1
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04141
Protein processing in endoplasmic reticulum
gmf04932
Non-alcoholic fatty liver disease
gmf05010
Alzheimer disease
gmf05012
Parkinson disease
gmf05014
Amyotrophic lateral sclerosis
gmf05017
Spinocerebellar ataxia
gmf05022
Pathways of neurodegeneration - multiple diseases
gmf05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115855441 (XBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
115855441 (XBP1)
05012 Parkinson disease
115855441 (XBP1)
05014 Amyotrophic lateral sclerosis
115855441 (XBP1)
05017 Spinocerebellar ataxia
115855441 (XBP1)
05022 Pathways of neurodegeneration - multiple diseases
115855441 (XBP1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
115855441 (XBP1)
09167 Endocrine and metabolic disease
04932 Non-alcoholic fatty liver disease
115855441 (XBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmf03000
]
115855441 (XBP1)
04131 Membrane trafficking [BR:
gmf04131
]
115855441 (XBP1)
Transcription factors [BR:
gmf03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, Jun
115855441 (XBP1)
Membrane trafficking [BR:
gmf04131
]
Autophagy
ER-phagy
ER stress-related proteins
115855441 (XBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
KASH_CCD
YabA
Motif
Other DBs
NCBI-GeneID:
115855441
NCBI-ProteinID:
XP_030716581
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All DBs
Position
13:68072800..68077645
Genome browser
AA seq
387 aa
AA seq
DB search
MVVVAAAQSPAAGAPKVLLLSGQPAAASAAAGAPVGRALPVMVPGQRGASPEAASGGPPQ
ARKRQRLTHLSPEEKALRRKLKNRVAAQTARDRKKARMSELEQQVVDLEEENQKLLLENQ
LLREKTHGLIVENQELRQRLGMDALVTEEEAETKGNGARPVAGSAERSTQTTCTSAAGAG
PVVTPPEHLPMDSDGVDSSDSESDILLGILFNLDPVMFFRCPSPESTSLEQLPEVDPEGP
SSLPVPPSPSLGTSSAKLEAINELIRFDHIYTKPLVLEIPSETESQANVVVKIEEAPSSP
SEKDHPEFTVSVKEELVEDDFIPELGISDLLSTSHCLKPSSYLLDAYSDCSYEGSPSPLS
DMSSLLGVDHSWEDTFASELFPQLISV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggtggcagccgcgcagagcccggccgccggggcacccaaagttctgcttctg
tccggccagcccgccgccgcctccgccgccgccggagccccggtcggccgggctctgccg
gtcatggtgccgggccagcgaggggccagcccggaggcggcgagcggggggccgccccag
gcgcgcaaacgacagcgcctcacgcacctgagccccgaggagaaggcgctgcggaggaaa
ctgaaaaacagagtagcagctcagactgccagagaccgaaagaaagctcgaatgagtgag
ctggagcaacaagtggtagatttggaagaagagaaccaaaaacttttgctagaaaatcag
cttttacgagagaaaactcatggcctcatagttgagaaccaggaattgagacagcgcttg
gggatggatgccctagtgactgaagaggaggcagagaccaaagggaatggagcgaggccg
gtggccgggtctgctgagcgcagcactcagactacgtgcacctctgcagcaggtgcaggc
ccagttgtcacccctccagaacatctccccatggattctgacggtgttgactcttcagac
tctgagtctgatatcctgttgggcattttgttcaacttggacccagttatgttcttcaga
tgtccctctccagagtctaccagcctggagcagctcccagaagtcgacccagaaggaccc
agttccttacccgtacccccctctccatccctggggacgtcatcagccaagctggaagcc
attaatgaactgattcgttttgaccacatatatacaaagcccctagtcttagagataccc
tctgagacagagagccaagctaatgtggtagtgaaaattgaggaagcaccttccagtccc
tcagagaaagatcaccctgaattcactgtctcagtgaaggaagaacttgtagaagatgac
ttcattccagagctgggtatctcagatctgctttcaaccagccactgcctgaagccatct
tcctacctactggatgcttatagtgactgtagctatgagggttccccttctcccttgagt
gacatgtcctctctgcttggtgtagaccattcctgggaggacacttttgccagtgaactc
tttccccagctgattagtgtctaa
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