Globicephala melas (long-finned pilot whale): 115855474
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Entry
115855474 CDS
T11080
Symbol
CLDN1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03272
Virion - Hepatitis viruses
gmf04382
Cornified envelope formation
gmf04514
Cell adhesion molecule (CAM) interaction
gmf04530
Tight junction
gmf04670
Leukocyte transendothelial migration
gmf05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
115855474 (CLDN1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115855474 (CLDN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115855474 (CLDN1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
115855474 (CLDN1)
09158 Development and regeneration
04382 Cornified envelope formation
115855474 (CLDN1)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
115855474 (CLDN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gmf03037
]
115855474 (CLDN1)
04147 Exosome [BR:
gmf04147
]
115855474 (CLDN1)
Cilium and associated proteins [BR:
gmf03037
]
Other cilia and associated proteins
Stereociliary proteins
115855474 (CLDN1)
Exosome [BR:
gmf04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
115855474 (CLDN1)
Exosomal proteins of colorectal cancer cells
115855474 (CLDN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Voltage_CLC
SUR7
DUF7937
Amastin
DUF2207_C
Cytochrom_B_C
HAAS_TM
DUF6479
Motif
Other DBs
NCBI-GeneID:
115855474
NCBI-ProteinID:
XP_030716666
LinkDB
All DBs
Position
4:77321726..77337791
Genome browser
AA seq
211 aa
AA seq
DB search
MANAGLQLLGFILAFLGWIGSIVSTALPQWRIYSYAGDNIVTAQAIYEGLWMSCVSQSTG
QIQCKIFDSLLNLNSSLQATRALMVIGILLGLVAIFVATIGMKCMKCLEDNEAQKMRMAV
IGGVIFLISGLAILVATAWYGNRIVQEFYDPMTPVNARYEFGQALFTGWAAASLCLLGGA
LLCCSCPQKATSYPTPRPYPKPAPSSGKDYV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgcggggctgcagctgctaggcttcatcctggctttcctgggctggattggc
tccatcgtcagcacggcgctgccccagtggaggatttactcctacgctggcgacaacatc
gtgacggcccaggccatctacgaggggctgtggatgtcctgcgtgtcgcagagcaccggg
cagatccagtgcaaaatcttcgactccttgctgaatctgaacagctctctgcaagcaacc
cgtgccttgatggtgattggcatcctgctgggactagtagccatctttgtggccactatc
ggcatgaagtgtatgaagtgcctggaagacaacgaggcacagaagatgcggatggctgtc
attgggggcgtgatctttcttatttcaggtctggctattttagttgccacagcatggtat
ggcaatagaattgttcaagaattctatgaccccatgaccccggtcaatgccaggtatgaa
tttggtcaggctctcttcactggctgggctgctgcttccctctgccttctgggaggtgcc
ctactttgctgctcctgtccccagaaagcaacatcgtacccaacaccaaggccctatcca
aaacctgcaccttccagtgggaaagactacgtgtga
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