Globicephala melas (long-finned pilot whale): 115855507
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Entry
115855507 CDS
T11080
Symbol
DEPDC5
Name
(RefSeq) GATOR1 complex protein DEPDC5 isoform X3
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
115855507 (DEPDC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115855507 (DEPDC5)
Membrane trafficking [BR:
gmf04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
115855507 (DEPDC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
115855507
NCBI-ProteinID:
XP_030716766
LinkDB
All DBs
Position
13:complement(65749635..65844474)
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AA seq
1628 aa
AA seq
DB search
MRTTKVYKLVIHKKGFGGSDDELVVNPKVFPYIKLGDIVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYITQKVEFAGIRAQAGELWVKNEKVMCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYDAKSLDEFPEINRA
SIRQDHKGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPQGDNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRSGPRDSRLGDDYNIPHWINHSFYTSKSQLFCNSFT
PRIKLAGKKPASEKAKNGRDTSLGTPKESENTLPIQVDYDAYDAQVFRLPGPSRAQRLAT
CRSVRERESHSRKSASSCDVSSSPSLPGQPLPTEEVRSQASDDSSLGRSANILMIPHPHL
HQYEVSSSLGYTSTRDVLENMMEPPQRDSSAPGRFHVGSAESMLHFRPGGYMPQRALINP
FAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSGQRDPTHSSAELLE
LAYHEATGRHSASHQPGDGTSFLNFTGTEELPVSLLSSSGAGMNPRTQNKDALEDSVSTS
PDPILTLSAPPVVPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQGLQNDYTEGCYDLLPE
ADIDRRDEEGVQMTAQQVFEEFVCQRLMQGYQIIVQPRAQQPSPAGPPPLSSSPLYGRGL
VSRNRPEEEDQYWLSMGRTFHKVTLKDKMITVTRYLPKYPYESAQIHYTYSLCPSHSDSE
FVSCWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACVTATKRIT
EGEAHCDIYGDRPRADEEEWQLLDGFIRFVEGLNRIRRRHRSDRMMRKGAAMKGLQMAGP
IPTHSLESTGPPVGKKGTSVLSALLEMEATQKCLGEQQVAVHGGKSSAPPAESSGVAMTP
TYVDSPRKVSPTPGPRGPCMPVRRRSRDLAFSSALNAWNWAEAEFEGPLKLNSVSEVSVD
QTATPMSDSTSLGVSTGQSVDRGNSQTFGNSQSSGEQGFPSANSSDSSSQQLAASSLTSS
STLVEILEAMKHPSTGVQLLPEQKGLSPCCFISAEVVHWLVNNVDGVQTQAMAIDIMQKM
LEEQLITHASGEVWRTFIYGFYFYKIVMDREPERVAVQQPTAWHTTAVDDFASFQRKWFE
VAFVAEELLHSEIPAFLLPWLPSRPASYASRHSSFSRSFGGRSQAAALLAATVPEQRTVT
LDVDVNNRTDRLEWCSCYYHGNFSLNAAFEIKLHWMAVTAAVLFEMVQGWHRKATSCGFL
LVPVLEGPFALPSYLYGDPLRAQLFIPLNISCLLKEGSEHLFDSFEPETYWDRMHLFQEA
IAHRFGFVQDKYSASAFNFPAETKPQYIHVTGTVFLQLPYSKRKFSGQPRRRRNSTSSAS
QSLFCEERVGYSWAYNTMLTKTWRSSATGDERFADRLLKDFTDFCVNRDNRLVTFWTSCL
EKMHASAP
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaacaaaggtctacaaacttgtcatccacaagaagggctttgggggcagtgat
gatgagctagtcgtgaaccccaaagtgtttccttacatcaagcttggagacattgtggag
attgctcaccccaacgatgagtacagccctctgcttttgcaggtcaagtcacttaaggag
gatttgcagaaagaaactatcagtgtggaccagacggtgactcaagtgtttcggctaaga
ccttatcaagatgtgtatgtgaatgtcgtagaccctaaggatgtgacccttgacctagtg
gaattaacctttaaggatcaatatattggccgtggggatatgtggcgactgaagaaaagt
ttggtcagcacatgtgcctatatcactcagaaggtggaattcgctggcatcagggcgcag
gccggggagctgtgggtcaagaatgagaaggtcatgtgtggttatataagcgaagatacc
agggtggtattccgttctacgtcagctatggtttacatatttattcagatgagctgtgaa
atgtgggattttgatatttatggggatctgtattttgagaaagctgtgaatggtttcctt
gctgatctctttaccaaatggaaggagaagaactgtagtcatgaagtgacagtggtccta
ttttctaggactttctatgatgcaaaatctcttgatgaatttcctgaaataaaccgagcc
tcaattaggcaggatcacaaggggcgattctatgaagacttctataaggtggtggtgcag
aatgagaggagagaagagtggacctccctcctcgtgaccattaaaaagctcttcatccag
tatccagtgctggtgcgactggaacaggcagagggctttcctcaaggagacaattctacc
tcagcacaaggaaactacctagaggccatcaatctgtcattcaatgtgtttgacaagcac
tacatcaaccgcaactttgaccgaactgggcagatgtctgtggtgatcacgcccggggtg
ggtgtgttcgaagtggaccggctactcatgatcctgaccaagcagcggatgatagataac
ggaatcggtgtggacttggtgtgcatgggggagcagccactgcatgctgtcccgttgttc
aagctgcacaatcggagtggccctcgcgactctcgcctgggtgatgactacaatatccct
cactggataaaccacagtttctacacatccaaaagccagctcttttgtaatagtttcacc
ccacgaataaaactggccggaaagaagcctgcctctgagaaagcaaaaaatggccgtgat
acgtctctggggactcccaaagaatctgagaacacccttcccatccaagtggattacgat
gcttatgacgcgcaagtcttcaggctgccaggcccatcccgggctcagcgcctcgccacc
tgcaggtccgtgcgagagcgggagagtcacagtcggaagagcgccagctcctgtgatgtc
tcatccagcccttccctgcctggccagccgctgcccacagaggaggtgaggagccaggct
tctgacgacagttccctgggcaggagcgccaacatcctgatgatccctcacccccacctg
caccagtatgaagtcagcagctccttgggctacaccagcactcgagatgtcctggagaac
atgatggagccaccacagcgggactccagtgcgccggggaggttccacgtgggcagcgca
gagtccatgctgcactttcgacctgggggatacatgccccagcgggcactgatcaacccc
tttgcaccctcgcggatgcccatgaagcttacgtccaacaggaggcgctggatgcacact
tttcctgtgggaccatctggagaggctatccagatccatcaccagacccgacagaacatg
gcagagctgcagggcagcgggcagagggacccgacccactcctctgcagagctgctggag
ttggcataccatgaagccactggaaggcacagcgcttcccaccagcctggcgatggcaca
tccttcttgaacttcactggaacagaagagcttcctgtcagcctgctcagcagcagtggt
gcaggtatgaatcctaggacccagaataaggatgctttagaggacagtgtttctacctct
ccagacccaattctgacgctgtctgctccccctgtagtgccaggcttctgttgcacagtt
ggcgtggactggaagtctctcactactccggcgtgccttcccctcaccacggactacttc
cccgaccgccagggcctgcagaatgactacacagagggctgctacgatctcctcccagag
gccgacatcgacaggagggacgaggaaggtgtgcagatgacggctcagcaggtgtttgag
gagtttgtctgccagcggctcatgcagggctaccagatcatcgtgcagcccagggcacag
cagcccagccccgctggcccgcccccgctcagcagcagcccgctctatggccgtggcctt
gtgtcccgaaaccgccctgaggaggaagaccagtactggctgagcatgggcagaactttc
cacaaagtcacactgaaggataagatgatcacagtgacacgataccttcccaagtaccct
tacgaatctgcccagatccactacacctacagcctctgcccctcccactcagactcggag
tttgtctcctgttgggtggaattctcgcacgagcggctggaggagtacaagtggaattac
ttagaccagtacatctgctctgccggctccgaggacttcagcttaattgagtctctgaag
ttctggaggacccgcttcctgctgctgccagcctgtgtcaccgccaccaagcgcatcaca
gagggggaggcccactgtgacatctacggggacaggcctcgggcagacgaggaggagtgg
cagctcctggatggcttcatccgattcgtggagggcctaaaccggatccgccggcggcac
cgctccgatcgcatgatgcggaaaggggccgccatgaaaggcttgcagatggctgggccc
atccctacccactccctcgagtcgaccggccccccggttgggaagaagggaacctcagtt
ctgtctgccctgctggaaatggaagccactcagaagtgcctgggagaacagcaggtggcg
gtgcatgggggcaagagctccgcccccccagccgagagcagcggcgtagccatgactccc
acctacgtggacagcccacgaaaggtcagtccaaccccagggccccgaggcccgtgcatg
cctgtccgtcgcagaagccgcgacctggccttcagctcggctctgaacgcgtggaattgg
gccgaagccgagtttgaggggccgttgaaactgaattcagtctcagaggtgtctgtggac
cagacggccaccccgatgtcggacagcaccagtctgggggtgagcacaggccagtccgtg
gacagaggcaacagccagacctttgggaactcgcagagctcaggggaacagggcttcccc
tctgcaaactccagtgacagcagctctcagcagttggcggccagctccttgacgtcctcc
tccaccctggtggagatcctggaggccatgaagcacccctcgacaggagtccagctgctc
cctgagcagaagggcctctcaccgtgctgcttcatcagtgcggaagtggtacactggctg
gtgaacaacgtggatggggtgcagacgcaggccatggccatcgacatcatgcagaaaatg
ctggaagagcagctcatcacacacgcctctggtgaagtctggcggaccttcatatatggc
ttctatttctacaagatagtgatggacagagagcctgagcgagtggccgtgcagcagccc
actgcctggcacacgacggcggtggacgacttcgccagcttccagcgcaagtggtttgag
gtggccttcgtggccgaggagctcttgcactcggagatccctgccttcctgttgccctgg
ctgcccagccggccagcctcctacgccagcaggcacagctccttcagccgcagctttggg
ggccggagccaggcagctgcgcttttagctgccactgtcccagagcagaggaccgtgacc
ctggacgtggatgtgaacaaccgcacagaccgactggagtggtgcagctgttactaccac
ggcaacttctcactgaacgcggccttcgagatcaagctgcactggatggcggtgaccgcc
gctgtgctctttgagatggtccaaggttggcatcgcaaggccacctcctgtggctttttg
ttggtgccggttttggagggtccctttgcgctgcccagttacctgtacggcgacccgctc
cgggcccagctcttcatcccactcaacatcagctgcctgctcaaggagggcagcgagcac
ctgtttgacagctttgaaccagaaacatactgggaccgaatgcaccttttccaggaagcc
attgcacacaggtttgggtttgttcaagataaatattctgcctctgctttcaacttccct
gctgagaccaagcctcagtacatccacgtcacaggcacggtgttcctgcagctgccctac
tccaagcgcaagttctcggggcagccacggcggcgccgcaactccaccagctccgccagc
cagagcctgttctgcgaggagagggtgggctacagctgggcctacaacaccatgctgacc
aagacctggcgctccagcgccaccggcgacgagaggtttgctgaccggctgctgaaggac
ttcacggacttctgcgtcaaccgtgacaaccggctggtgaccttctggacgagctgcctg
gagaagatgcacgccagcgccccgtga
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