Globicephala melas (long-finned pilot whale): 115855719
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Entry
115855719 CDS
T11080
Symbol
RNF135
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF135
KO
K16272
E3 ubiquitin-protein ligase RNF135 [EC:
2.3.2.27
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmf04121
]
115855719 (RNF135)
Enzymes [BR:
gmf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115855719 (RNF135)
Ubiquitin system [BR:
gmf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115855719 (RNF135)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-RING_6
zf-RING_10
zf-RING_4
Lzipper-MIP1
PRY
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
115855719
NCBI-ProteinID:
XP_030716966
LinkDB
All DBs
Position
20:complement(2925574..2944976)
Genome browser
AA seq
425 aa
AA seq
DB search
MGPGGGRSGGGLGTRAGLDACPAVPMXLAEDHLGCIICHELLARPATLSCGHSFCHNCLM
GLWGAGRHGSCPTCREGAERPLQLRKNTMVQDLEDKYSREARELEGPNPAPGPPRRTAQL
PAVAQKSITEVGWGLAELVERLIDXRSLQSQRHLPESEPGNEMSIAAMALSDGVDFSLAS
PKLVTSNTPEGKMRDXLHDLEEIQEKLQENFMWKEALEEQMQVELPEALSSSSCPLPDQS
HLAPKRASSFAQWVINPTFDLGSLSCSLEVSKDXTVSHRPQPYPWSHERFASCQALCSQA
LSSGQQYWEVDTQRCSHWAVGVASWGMRRDQILGRTRDSWYVEWKGTSQLSAWDMVKKTV
LGSNRPSVVGIWLDLEEGKLAFYSVADQVKLVSECPVSAAFPLHPAXWLYGLFPGSSLTM
RQINV
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggccccgggggtgggcggagcggcggcggtctggggaccagggcgggcctggacgcc
tgcccggccgtccccatgtgactggccgaggaccacctgggctgcatcatctgtcacgag
ctgctggcccggcccgccacgctctcctgcggccacagcttctgtcacaactgcctgatg
ggtctgtggggcgcagggcgccacgggtcctgccccacctgccgcgagggcgccgagcgg
ccgctgcagctgcggaagaacacgatggtgcaggacctggaggacaagtacagtcgggag
gcacgcgagctggagggcccgaacccagcgcccgggcccccgcgccgcacagcgcagctg
ccggcggtggcacagaagagcatcacagaagttggctgggggctcgcagagctggtggaa
cggcttatagatnacaggagccttcagagtcagagacatctcccagaatctgaaccaggc
aatgaaatgagcattgcggccatggctttgtcagatggggtggacttttccttggcttct
ccaaaactagtgacttccaacacacctgaggggaaaatgagagacnatctccatgacctt
gaagagatccaggaaaaattacaagaaaacttcatgtggaaagaggcccttgaagaacaa
atgcaggttgaactcccagaagctctgtcttcctcctcatgcccactgcctgaccagagc
cacctggcacccaagagggcttcctcgttcgctcaatgggtcatcaatccaacctttgac
ctagggagcctctcctgtagcctggaggtgtccaaggatnncactgtatctcaccgccca
cagccctatccctggagtcatgagaggtttgcctcctgccaggccttatgttcccaggct
ctctcttctgggcagcagtactgggaagtggacactcagcgatgtagccactgggcagtt
ggggtggcttcctgggggatgaggcgtgaccagatcctgggaaggaccagggactcctgg
tatgtagagtggaaagggactagccagctctctgcatgggacatggtcaagaaaactgtc
cttggctcaaacagacctagtgtggtgggcatctggctggaccttgaggagggaaagctt
gccttctattccgtggctgatcaggtgaagctcgtctctgagtgcccagtctctgctgcc
tttcctctgcaccctgccntctggctgtatggcttattccctggaagctctctgactatg
aggcaaataaacgtataa
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