Globicephala melas (long-finned pilot whale): 115855742
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Entry
115855742 CDS
T11080
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03030
DNA replication
gmf03410
Base excision repair
gmf03420
Nucleotide excision repair
gmf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115855742 (RFC4)
03410 Base excision repair
115855742 (RFC4)
03420 Nucleotide excision repair
115855742 (RFC4)
03430 Mismatch repair
115855742 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmf03032
]
115855742 (RFC4)
03036 Chromosome and associated proteins [BR:
gmf03036
]
115855742 (RFC4)
03400 DNA repair and recombination proteins [BR:
gmf03400
]
115855742 (RFC4)
DNA replication proteins [BR:
gmf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
115855742 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
115855742 (RFC4)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
115855742 (RFC4)
DNA repair and recombination proteins [BR:
gmf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
115855742 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
115855742 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_assoc_2
Rad17
DUF815
AAA_16
AAA_22
AAA_30
AAA_11
AAA_24
Mg_chelatase
AAA_28
RuvB_N
SLFN-g3_helicase
AAA_5
AAA_19
ResIII
DNAX_ATPase_lid
AAA_7
Motif
Other DBs
NCBI-GeneID:
115855742
NCBI-ProteinID:
XP_030717032
LinkDB
All DBs
Position
4:80387513..80401750
Genome browser
AA seq
364 aa
AA seq
DB search
MQAFLKGTSISSKPPLTKDRGVAATARSSGENKKAKPVPWVEKYRPKYVDEVAFQEEVVA
VLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVR
EKVKNFAQLTVTGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLIC
NYVSRIIEPLTSRCSKFRFKPLSDKIQEQRLLDIADKEHIKISNEGLAHLVKVSEGDLRK
AITFLQSATRLTGGKEVTEKVITDIAGVIPAETIDGVFAACQSGSFDKLEAVVKDLIDEG
HAATQLVNQLHDGVVENENLSDKQKSVITEKLAEVDKCLADGADEHLQLIGLCATVMQQL
TQNC
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatttctaaaaggcacatctatcagcagtaaaccaccattgactaaggatcga
ggagtagctgccactgccagaagtagtggagagaacaagaaagctaaacctgttccgtgg
gtggaaaaatatcgcccaaaatatgtggatgaagttgctttccaggaagaagtggttgca
gtgctaaaaaagtctttagaaggagctgatctccctaatctcttgttttacggcccacct
ggaactggaaaaacatccactattttggcagcagctagggaactctttgggcctgaactt
tttcgattaagagttcttgagttaaatgcatctgatgaacgtggaatacaagtagttaga
gagaaagtgaagaattttgcccaattaactgtgacaggaagccgttcagatgggaagcca
tgtcctccttttaaaattgtgatcctggatgaagcagattctatgacctcagctgctcag
gcagctttaagacgtaccatggagaaagagtctaaaaccacccgattctgcctcatctgt
aactatgtcagtcgaataattgaacctctgacctctagatgttctaaattccgcttcaaa
cctctgtcagataaaattcaagagcagcgattactagacatcgctgataaagaacatatc
aaaattagcaatgagggactagctcatcttgttaaagtgtcagaaggagacttaaggaaa
gccattacatttcttcaaagtgctactcgattaacaggtggaaaggaggtcacagaaaag
gtgatcacagacattgctggggtaataccagctgaaacaattgatggagtatttgctgca
tgtcagagtggctcttttgacaaactagaagctgtggtaaaggacttaatagatgagggt
catgcagcaactcagcttgtaaatcaacttcatgatggggttgtagaaaatgagaacctt
tctgataaacagaaatctgttattacagaaaaacttgctgaagttgataaatgtttagca
gatggtgctgatgaacatctacagctgatcggcctctgcgcaactgtcatgcagcagtta
actcagaattgttaa
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