Globicephala melas (long-finned pilot whale): 115855756
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Entry
115855756 CDS
T11080
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03440
Homologous recombination
gmf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115855756 (TOP3A)
03460 Fanconi anemia pathway
115855756 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmf03032
]
115855756 (TOP3A)
03400 DNA repair and recombination proteins [BR:
gmf03400
]
115855756 (TOP3A)
Enzymes [BR:
gmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
115855756 (TOP3A)
DNA replication proteins [BR:
gmf03032
]
Eukaryotic type
DNA Topoisomerases
115855756 (TOP3A)
DNA repair and recombination proteins [BR:
gmf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
115855756 (TOP3A)
FA (Fanconi anemia) pathway
115855756 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-C2H2_10
Zn_ribbon_GRF_2
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
115855756
NCBI-ProteinID:
XP_030717085
LinkDB
All DBs
Position
20:19334260..19361844
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AA seq
1003 aa
AA seq
DB search
MIFPVVRRALTWLPRPGSRALTLADMEVALRGVRKILCVAEKNDAAKGIADLLSGGRMRR
REGLSRFNKIYEFDYRLRGQNVTMIMTSVSGHLLAHDFQMQFRKWQSCNPLVLFEAEIEK
YCPENFLDIKKTLEREARQCQVLVIWTDCDREGENIGFEIIHVCKAVKPSLQVLRARFSE
ITARAVQAACENLMEPDRRVSDAVDVRQELDLRIGAAFTRFQTLRLQKIFPEVLAEQLIS
YGSCQFPTLGFVVERFKAIQAFVPETFHRIRVTHDHRDGAVEFSWKRHRLFNHTACLVLY
QLCMEDPRATVVEVRSKAKSKWRPQALDTVELEKLASRKLRINAKETMRIAEKLYTQGYI
SYPRTETNIFPKDLDLTALVEEQTHDPRWGPFAQSILERGGPTPRNGNKSDQAHPPIHPT
KYTDSLQGDEQRLYELIVRHFLACCSQDAQGQETTVEIDIAQERFVAHGLVILARNYLDV
YPYDRWSEKTLPVYSRGSCFQPSTVEMVDGETSPPQLLSEADLIALMEKHGIGTDATHAE
HIETIKARMYVGLTPDKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKLVVLQQQVQKYKQVFIEAMAKAQRLDEALSQYFGAGVELAQQEAIFPAVPEPVRKCPQ
CGKDMVLKTRKSGGFYLSCTGFPECRSAVWFPDSVLEASRDGSVCPVCQPHPVYRLKFKF
KRGSLPPTMPLEFVGCVGGCDETLREILDLRFSRGPTRAGQPVSQPSGHLQASQPLDRMG
SSQHGHPQPPAIRPSNALARTAPLPAAEGEGNSVTCNCGREALLLTVRKEGPNQGRQFYK
CSGGGCNFFLWADSGHPEAGGPPSEVPRPPGGSLGRPPGSGKPLGGPGSPGDGGGGARCL
CSQPAVTRTVQKDGPNKGRQFHTCAKPREQQCGFFQWVDENVAPGTFGGPPWAGARGGSR
EPEARSKRAQAGSSDAGSAAKKPRKCSLCHQPGHTRPFCPQNR
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgatcttccctgtcgtccgccgcgcgctcacctggctgccgcggcctgggagccgggcg
ctgaccctcgccgacatggaggtggccctgcgaggcgtgcggaagatcctctgcgtggcc
gagaagaacgacgcggccaagggcatcgcggacctgttgtccggcggccgcatgcggcgg
agagaaggactttccagattcaacaagatctatgaatttgattatcgtctgcgtggccag
aacgtcaccatgataatgacttcagtctcgggacacttgctggctcatgatttccagatg
cagtttcgcaagtggcagagctgcaatcctcttgtcctctttgaagcagaaattgaaaag
tactgcccagagaattttttagacatcaagaaaactctggagcgagaggctcggcagtgc
caggtgctggtgatctggaccgactgcgacagagaaggtgaaaacatcgggtttgagatc
atccacgtgtgcaaggctgtgaagcccagcctgcaggtgctgcgagcccgtttctccgag
atcaccgcccgcgctgtccaggcggcctgtgaaaacctgatggagcccgaccgcagagtg
agcgacgccgtggacgtgagacaggagctggacctgcggattggggctgccttcaccagg
ttccagaccctgcggctgcagaagatcttccctgaggtgttggcggagcagctgatcagt
tatggcagctgccagttccccaccctggggttcgtggtggagaggttcaaagccattcag
gcatttgtgccagaaaccttccacagaatcagagtgactcacgaccacagggatggcgca
gtggagttcagctggaaaaggcatcggcttttcaaccacacggcttgtctcgtcctctat
cagctgtgcatggaggatcccagggcgaccgtggtggaggtcaggtccaaggcaaaaagc
aagtggaggcctcaagctttggacactgtggagcttgagaagctggcttctcgaaagttg
aggataaatgctaaagaaaccatgaggattgctgaaaagctctacactcaagggtacatc
agctatccccgaactgaaacaaacattttccccaaagacttagacctgacggcgctggtg
gaggaacagacccacgatccacgctgggggccctttgcccagagcattctagagcggggc
ggccccactccacgcaacgggaacaagtctgaccaagctcaccctcccatccaccccacc
aagtacacggacagcctgcagggggacgagcagcgactgtacgagctcatcgtccgccac
ttcctggcctgctgctcccaggatgcccagggccaggagaccaccgtggagattgacatc
gcacaggagcgcttcgtggcccacggcctcgtaatcctggcccgaaactatctggacgtg
tatccctacgatcgctggagtgaaaagaccctccctgtctacagtcgaggctcctgcttt
cagcccagcaccgtggagatggtggacggggagaccagtccaccccagctgctcagtgag
gccgaccttatcgccctcatggagaagcacggcatcggtaccgacgcgacgcacgcggag
cacatcgagaccatcaaggcccgaatgtacgtcgggctcacgccagacaagcgctttctc
cccgggcacctgggcatggggcttgtggaaggctatgactccatgggctacgagatgtcc
aagcctgacctgcgggccgagctggaggctgacctgaagctcatctgcgaggggaagaag
gacaagctcgtggtcctgcagcagcaggtgcagaagtacaagcaggtcttcatcgaagcc
atggccaaagcccagaggttggacgaggccttgtcgcagtactttggggcaggggtggag
ctggcccagcaagaagccatcttcccagctgtgccagagcccgtcaggaagtgcccacag
tgcggcaaggacatggtcctcaagaccaggaagagcggcgggttctacctcagctgcacg
gggttcccggaatgtcgctcggccgtgtggttcccggacagtgtgctggaggccagcagg
gacgggagcgtgtgtccagtgtgtcagccacaccccgtttacaggttgaagttcaagttt
aagcgaggcagccttcccccaaccatgccactggaatttgtcggctgcgttggtggctgt
gacgagaccctgagggagatcttggacctcaggttttcacgggggcccacccgagctggc
cagccggtcagccagccctccggccacctgcaggccagccagcccctggacagaatgggc
agcagccagcacggccacccccagcctcctgccatcaggccctcgaatgctctggccagg
actgcgcccctgcccgccgccgagggcgaaggcaactcggtgacctgcaactgtggccgg
gaggccctgctgctcaccgtccggaaggaggggcccaaccagggccgccagttctacaag
tgcagcggcggcggctgcaacttcttcctctgggccgacagcggccacccagaagcaggg
gggcctccctccgaggtgcccagacccccgggcggctcactgggacgcccgccgggctca
gggaagcccctgggcgggcccggaagccccggcgatggtggcggcggcgcacgctgcctg
tgcagccagcccgctgtcacgcgcactgtgcagaaggacgggcccaacaaggggcgccag
ttccacacgtgcgccaagccccgggagcagcagtgcggcttcttccagtgggtggacgag
aacgtggccccagggacctttggaggccccccctgggcaggagccagaggaggaagccgg
gagccggaggccagaagcaaaagggcccaggctggttcctcggacgccgggtccgcggcc
aagaaaccccggaagtgcagcctttgccaccagcctggacacacccgtcccttctgtcct
cagaacagatga
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