Globicephala melas (long-finned pilot whale): 115855826
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Entry
115855826 CDS
T11080
Symbol
USP43
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43 isoform X1
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gmf01002
]
115855826 (USP43)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmf04121
]
115855826 (USP43)
Enzymes [BR:
gmf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115855826 (USP43)
Peptidases and inhibitors [BR:
gmf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115855826 (USP43)
Ubiquitin system [BR:
gmf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115855826 (USP43)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
115855826
NCBI-ProteinID:
XP_030717278
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All DBs
Position
20:13370934..13433345
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AA seq
1127 aa
AA seq
DB search
MDPGVGAATGEGPPAPRPRRRRSLRRLFGRFLLALGSRFRPGDSPPRPQPQPGHGNGDGE
GGFAGPPGPDPAAPGSPGEERPPRPQPQLSAGDGARIPGAQGLKNHGNTCFMNAVVQCLS
NTDLLAEFLALGRYRAAPGRAEVTEQLAALVRALWTREYTPQLSAEFKNAVSKYGSQFQG
NSQHDALEFLLWLLDRVHEDLEGAARGLGSDKLQPEARKTSEDLPSPSAQLPLGQSFVQS
HFQAQYRSSLTCPHCLKQSNTFDPFLCVSLPIPLRQTRFLSVTLVFPSKSQRSLRVGLAV
PILSTVAALRKMVAEEGGIPVDEVILVELHPTGLQRSFFDEEDLNTIAEGDNVYAFQAPP
SPGQEMLSARPSGLPISPRLAVCEGQRLSLPVHSETTVLILFCNLVGSGQQASRFGPPFL
IREDRAISWVQLHQCILSKVRYLMKSEASVQNLGSLFSIRVVGLSLACSYLSPKDSQPLY
HWTVDRALHLRRPGGPPHIKLAVEWDSGTKEHLFGSIQEERVQDADSVWRQQQAHQQQSC
SLDECFQFYTKEEQLAQDDAWRCPHCQALQQGVVKLSLWTLPDILIIHLKRFCQVGERRN
KLSTLVKFPLAGLDMAPHVAQRSTGPKASPGPWPPSWKQPACLPTSYPPDFLYDLYAVCN
HHGSLQGGHYTAYCRNSLDGQWYSYDDSTVEPLLEDEVNTRGAYILFYQKRNSIPPWSAS
SSMRGSTSSSLSDHWLLRLGSSDGSMRGSLLSWSPTPGPARPQLPGPASCTRSLPSQGKG
GLESRPLARGVQGRSISMKVPTPSRAKQGTFKTMPLRWSFGSREKPLGASVELVEYLESR
RRPRSTSQSIVPLLTGTAGGDEKSDATLSAKGEDSGRAGDRVLAEAPCPSGHPGRCTVPG
NSDGPNAASNLKENASQDIRLPRQCDLPLTVMSSTDGGKRARPEGQRTTSCKGSGLAGSS
GQTPSPKKAPSAATLSRNSADSCPNTFGKMRANVERRDPATDRFPQGTLPFLRSVFWKRE
SRKSDRAEAVSGRQSPAVNERARGSSPSLRIRESLARGPASPLERDVRSAPSSLRLPRKA
GRLPRATALGTSQRSVPGEQTSFGTLPKVKYHTLSLGRKKTLPESSF
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggacccgggcgtgggggccgcgaccggagaggggccgcccgcgccccggccccgccgc
cgccgctccctgcgccgcctgtttggccgcttcctgctggcgctgggcagccgcttccgc
cccggggactcgccgccccggccccagccccagccgggacacggcaatggcgacggggag
ggaggctttgctggccccccgggcccggatccagctgctcccggaagccccggggaggag
cgcccgccccgaccccagccccagctctccgccggcgacggggcgcggatcccgggagct
cagggcttgaagaaccacggcaacacctgtttcatgaacgccgtggtgcagtgtctcagc
aacaccgacctgctggccgagttcctggcgctggggcgctatcgggcggcgccgggccgc
gccgaggtcaccgagcagctggcggcgctggtgcgcgcgctctggacgcgcgaatacacg
ccccaactttccgccgagttcaagaacgctgtctccaagtatggctctcagttccaaggc
aattcccagcacgacgccctggagttcctgctctggttgctggatcgtgtgcacgaggac
ttggagggcgcggcccgggggctggggtccgacaagcttcagcctgaagccaggaagacc
tccgaggacctcccgtcgccatcagctcagcttcctctaggccaaagctttgtgcaaagc
cactttcaagcacagtacagatcttccttgacctgtccccactgcctgaaacagagcaac
accttcgatcctttcctgtgtgtgtcactgcctatccccttgcgacagacgagattcttg
agcgtcaccttggtcttcccctctaagagccagcggtccctgcgggttggcctggccgtg
ccaatcctcagcacggtggcagccctgaggaagatggttgcagaggaaggtggcatccct
gtggatgaggtgatcttggttgaacttcatcccactggactccagcggtctttctttgat
gaagaggacttgaatactattgcagagggagataatgtgtatgccttccaagcccctccg
tcacctggccaggagatgctctcagctcgtccatctggtctacccatctccccacgcttg
gcagtctgcgagggtcagcgattatccctgcccgtccacagtgagaccacggtgctaatc
ctcttctgtaatttggtgggctcaggccagcaggccagcaggtttgggccacctttcctg
attagggaagacagagccatctcatgggtccagctccatcagtgcattctcagtaaggtc
cgctatctcatgaagagcgaggcttctgtacagaacctggggtcactgttctccatccgg
gttgtggggctgtccctggcctgcagctacttgtccccaaaggacagccagcccctctat
cactggacagttgacagggctctgcacctcaggaggccgggaggccccccgcacatcaaa
ctggctgtggagtgggacagtggcaccaaggagcacctgttcgggagcatccaggaggag
cgggtccaggacgcggacagcgtgtggcggcaacagcaagcccaccagcagcagagctgc
tccctggacgagtgtttccagttctacaccaaggaggagcagctggcccaggacgatgcg
tggcggtgtccccactgccaggccctgcagcagggcgtggtgaagctgagcctgtggacc
ctgcccgacatcctcatcatccacctcaaacggttctgccaagtgggcgagaggagaaac
aagctctccacgctggtgaagttcccgctcgccggcctcgacatggctccccatgtggcc
cagagaagcacgggccccaaggcctccccgggcccctggcctccttcctggaagcagccg
gcctgcctgcccaccagctacccaccagacttcctgtacgacctgtacgcggtctgcaac
caccacggcagtttgcaaggtgggcattacacagcctactgccggaactctctggatggc
cagtggtacagttatgacgacagcacggtggaaccgcttctagaagatgaggtcaatacg
cgaggggcttacatcctgttttatcagaagagaaacagcatccctccctggtcagccagc
agctccatgagaggttccaccagttcctccttgtccgatcactggctcctccggcttggg
agcagtgatggtagcatgaggggcagcctgctgtcctggagccccacccccggccctgcc
cggccccagctgcctgggcctgcctcctgcaccaggagcctccccagccaaggaaaggga
ggcttggagtccaggcctttggcacggggtgtccaaggccgcagcatcagcatgaaggtg
cccaccccttcccgagccaagcaggggaccttcaagaccatgcccctccggtggtctttt
ggctccagggagaaacccctgggtgcctccgtcgagctggtagagtacttggagtccaga
cggagacctcggtccacgagccagtccatcgtgccgctgctgacgggcactgctggtggg
gatgagaagtcagacgccaccctctccgctaagggtgaagatagtgggcgagccggcgac
agagtgctggccgaagcgccctgcccctcgggccaccccggccgctgcacggtccctggc
aactcagatggcccgaatgcagcaagcaacctcaaggaaaacgcaagtcaggatatcagg
ctgcccagacaatgtgacctgcccctcacagtgatgtcctcaacagacggcgggaaacga
gcccggccggagggccaaaggaccacaagctgtaagggaagtggcctggcggggagcagt
ggccaaacaccctcccccaagaaggctcccagcgctgcgacgttatctagaaacagtgca
gacagttgcccaaatacctttggcaagatgagggctaatgtggagagaagggaccccgca
acagacagattcccacagggaaccctcccctttctgaggtctgtgttttggaagagggag
agcaggaagagtgacagggcagaggcggtgagtggcaggcagagcccagctgtgaatgag
cgggcccggggctcgtctccatccctcaggattcgagagagcctggccaggggccccgcc
agccccctggagagggacgtccggtcagcgcccagctctctgcgcctccctcgcaaggcc
ggcaggctcccgagggccactgcccttggcacatcacagaggagtgtccccggggagcag
acttctttcggcaccttgccaaaggtgaagtaccacacgctctccttaggtcggaagaaa
acgttgcccgagtccagcttctga
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