KEGG   Globicephala melas (long-finned pilot whale): 115855853
Entry
115855853         CDS       T11080                                 
Symbol
PER1
Name
(RefSeq) period circadian protein homolog 1
  KO
K21944  period circadian protein 1
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf04710  Circadian rhythm
gmf04713  Circadian entrainment
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    115855853 (PER1)
   04713 Circadian entrainment
    115855853 (PER1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gmf03400]
    115855853 (PER1)
DNA repair and recombination proteins [BR:gmf03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    115855853 (PER1)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 115855853
NCBI-ProteinID: XP_030717363
LinkDB
Position
20:complement(12206162..12221207)
AA seq 1271 aa
MSGPLEGADGGGDPRPGESFCPGGAPSPGPPQHRPCPGASLADDTDANSNGSSGNESNGP
ESRGASQRSSHSSSSGNGKDSALLDTTESSKSTNSQSPSPPSSSIAYSLLSASSEQDNPS
TSGCSSEQSARARTQKELMTALRELKLRLPPERRGKGRSGTLATLQYALACVKQVQANQE
YYQQWSLEEGEPCAMDMSTYTLEELEHITSEYTLRNQDTFSVAVSFLTGRIVYISEQAGI
LLRCKQDVFRGARFSELLAPQDVGVFYGSTAPSRLPTWGTGASAGSGLKDFTQEKSVFCR
IRGGPDRDPGPRYQPFRLTPYVTKIRVSDGAPAQPCCLLIAERIHSGYEAPRIPPDKRIF
TTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPF
DHSPIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNEDVFTPPVPSPAL
SLDPDIQELSEQIHRLLLQPVHSPSPTGFCGVGQVTSPGPLLSPGSSSASNGGDAEGPGP
PAPVTFQQICKDVHLVKHQGQQLFIESRARPLPRPRVPAAGTFKAKTLPCQSADPELEVA
PALTQALVASAPEEAERKEASGCSYQQINCLDSILRYLESCNLPSTTKRKCTSSSSCTAS
SASDEDRQRAGAVSVGAEKDPSAVLSGEGAAPLKEPVVGGGALSPLALANKAESVVSVTS
QCSFSSTIVHVGDKKPPESDIIMMEDLPGLPLGPAPSPAPSPTVAPDPAAGAYRPVGLTK
AVLSLHTQKEEQAFLSRFRDHGRLRGLDGSSTAPSGPGCRHGPAAPGRRHHCRSKAKRSR
QHPTPQAEAPCPVSHPSPVPSSAPWPPPPATPPFPAVVQPCPLPAFSPRGGPQPLPPAPT
SVSPAAFPAPLVTPVVALVLPNYLFPAPPTYPCGAPQAPASHSPSPSLPLPPPSPPRRPD
SLLFNSRCSSPLQLNLLQLEEPPRVEGSSAGHPPPSEETADPAARPVEITESSNQDALSG
SSDLLELLLQEDSRSGTGSAASGSLGSGLGSGSGSGSHEGSSTSASITRSSQSSHTSKYF
GSVDSSEAEAGAARARAEPGDQVIKYVLQDPIWLLMANADQHVMMTYQVPSRDMASVLKQ
DRERLRAMQKQQPRFSEDQRRELGAVHSWVRKGQLPRALDVMACVDCGSSTQDPGHPDDP
LFSEMDGLGLEPMEEGGGEAGGGGGEGEGGDEAQAQAGAAVSSSQDLAMEEEEQGGSSSS
PALPAAGNGTS
NT seq 3816 nt   +upstreamnt  +downstreamnt
atgagcggccccctcgaaggggctgatgggggaggggaccccaggccgggggaatccttt
tgtcctggaggggctccatcccctgggcctccacagcatcgaccttgtcctggcgccagc
ctggctgacgacacggatgccaacagcaatggctccagcggcaatgagtccaatggaccg
gagtccaggggtgcatctcagcggagctcacatagctcctcctccggcaatggcaaggac
tcggccctgctggacaccactgaaagcagcaagagcacaaactctcagagcccatcccca
cccagcagttccattgcctacagcctcctgagtgccagctcagagcaggacaacccgtct
accagtggctgcagcagtgaacagtcagctcgggcaaggacccagaaagaactcatgacg
gcgctgcgggagctcaagcttcggctgccaccagagcgcaggggcaagggccgctctggg
accctggccacgctgcagtacgcactggcctgtgtcaagcaggtgcaagccaaccaggaa
tactaccagcagtggagcctggaggagggcgagccttgtgccatggacatgtccacctac
actctggaggaactggagcacatcacatctgagtacacgcttcgcaaccaggatactttc
tccgtggctgtctccttcctgacaggccgcatcgtctacatttctgagcaggcaggtatc
ctgctgcgctgcaagcaggatgtgttccgcggtgcccgcttctcagagctcctggctccc
caggatgtgggcgtcttctatggttccactgccccatctcgcctgcccacctggggcacg
ggggcctcggcaggttcaggcctcaaggacttcacccaggagaagtcggtcttctgccgt
atcagagggggtcctgaccgagatcccgggcctcggtaccagccattccgcctaacccca
tatgtgaccaagatccgggtctctgatggggcccctgcacagccgtgctgcctgctgatc
gcagagcgcattcactctggttatgaagctccccggattccccccgacaagaggatcttc
actacgaggcacacgcccagctgcctcttccaggatgtggatgaaagggccgccccgttg
ctgggctacctcccccaggacctcctgggggccccagtgctccttttcctgcatcccgag
gaccgacccctcatgctggccatccacaaaaagatcctgcagctggctggccagcccttt
gaccactcccctatccgcttctgcgcccggaatggggagtacgtcaccatggacaccagc
tgggctggcttcgtgcacccctggagccgcaaggtggcctttgtgttgggccgccacaaa
gtacgaacggcgcccctgaatgaagacgtgttcactcccccagtccccagtcccgctctc
tccctggaccctgatatccaggagctctctgagcagatccaccggctgctgttacagcct
gtgcacagccccagccctaccgggttctgtggagtcggccaggtgacttccccaggccct
ctcctcagccctggctcctccagtgccagcaacgggggtgacgccgagggacctgggcct
cctgcaccggtgaccttccagcagatctgtaaggacgtgcacctggtgaagcatcagggg
cagcagctttttattgagtcccgggcccggcctctgccccggccccgtgtccctgctgca
ggcacattcaaggccaagacccttccctgccaatctgcagacccagagctggaggtggca
cctgctctgacccaggccctagtagcctcagctcctgaggaggctgagcggaaagaagcc
tcgggttgctcctaccagcagatcaactgcctggacagcatcctcaggtacctggagagc
tgcaacctccccagcacgaccaagcgcaagtgcacctcctcctcgtcctgcaccgcctct
tcggcctccgacgaggacaggcagcgggcgggagcggtctctgtgggggccgagaaagat
ccatcggcagtgctgtctggggagggggccgcccctctgaaggagccggtggtgggagga
ggcgccctgagcccgctcgccctggccaataaggcggagagcgtggtgtccgtcaccagt
cagtgtagcttcagctccaccatcgtccatgtgggagacaagaagcccccggaatcggac
atcatcatgatggaggacctgcctggcttgcctcttggcccagctcccagcccagccccc
agccccacggtggcccctgacccagccgcaggtgcctaccggccagtgggcctgaccaag
gctgtgctgtccctgcacacccagaaggaggagcaggccttcctcagccgtttccgcgac
catggcaggctgcgtggacttgacggctcctccacggccccctcgggccccggctgccgc
cacggccccgcagcccccggccgccgccaccactgccgatccaaagccaagcgctcccgc
cagcacccgacccctcaggccgaagccccctgccccgtctcccacccgtcacctgtgcca
tcctctgccccctggcccccaccaccagccacgccgcccttcccggctgtggtccagccc
tgccccctccccgcgttctcccccagaggaggcccccagcctctccctcctgcacccaca
tctgtgtctcctgcagctttccctgccccactggtgaccccagtggtggccttggtgctc
cctaactatctcttccctgccccacccacctacccctgtggggcaccccaggcccccgct
tcccactccccttctccgtccctgcccctgccgccccccagccctccccgccgccccgac
tctctgctcttcaactcgagatgcagctccccgctccagctaaacctgctgcagcttgag
gagccccctcgtgtcgaggggagtagtgctgggcacccccctcccagcgaggagactgcc
gacccagcggccagaccggtggagataactgagtcctccaaccaggacgcgctctcgggc
tccagcgacctgctggagttgctgctgcaggaggactcgcgctctggcacgggctctgct
gcctcgggctccttgggctctggcttgggctctgggtctggctcaggctcccatgagggg
agcagcacctcagccagcatcacgcgcagcagtcagagcagccacacgagcaagtacttc
ggcagcgtcgattcttccgaggctgaggctggggctgcccgtgccagggctgagcccggg
gaccaggtcattaagtacgtgctccaggatcccatctggctgctcatggccaatgctgac
cagcatgtcatgatgacctatcaggtgccctccagggacatggcctctgtgctgaagcag
gaccgggagcggctccgggctatgcagaagcagcagcctcggttctcagaggaccagcgg
agggaactgggtgctgtgcactcctgggtccggaagggtcaactgcctcgggcccttgat
gtgatggcctgtgtggattgcggtagcagcacccaagaccctggccaccctgatgaccca
ctcttctcggaaatggatggactggggctggagcccatggaggagggtgggggcgaggcg
ggtggcggtggtggtgagggcgagggcggtgatgaggcccaggcccaagctggggccgcg
gtctcaagctctcaggacctggccatggaggaggaggaacaaggtgggagctcatccagt
ccagccttacctgccgcaggaaatggcaccagctag

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