Globicephala melas (long-finned pilot whale): 115855885
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Entry
115855885 CDS
T11080
Symbol
EIF4A1
Name
(RefSeq) eukaryotic initiation factor 4A-I isoform X1
KO
K03257
translation initiation factor 4A
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115855885 (EIF4A1)
03012 Translation factors [BR:
gmf03012
]
115855885 (EIF4A1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmf04147
]
115855885 (EIF4A1)
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115855885 (EIF4A1)
mRNA cycle factors
Stress granule specific factors
115855885 (EIF4A1)
Translation factors [BR:
gmf03012
]
Eukaryotic type
Initiation factors
eIF-4
115855885 (EIF4A1)
Exosome [BR:
gmf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115855885 (EIF4A1)
Exosomal proteins of bladder cancer cells
115855885 (EIF4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
UvrD-helicase
AAA_30
Flavi_DEAD
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
115855885
NCBI-ProteinID:
XP_030717446
LinkDB
All DBs
Position
20:11788135..11794457
Genome browser
AA seq
406 aa
AA seq
DB search
MSASQDSRSRDNGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQ
RAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVV
MALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFV
LDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEE
LTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVS
AMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRI
GRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgagtcaggattcccgatctagagacaacggccccgatgggatggaacccgaa
ggcgtcatcgagagtaactggaatgagattgttgacagctttgatgacatgaacctttcg
gagtcactcctccgtggcatctacgcctatggttttgagaagccctctgccatccagcag
cgagccattcttccttgtatcaagggttatgatgtgatcgctcaagcccaatctgggact
gggaaaacggccacttttgccatatcaattttgcagcagattgaattggatctaaaggcc
acccaggccttggtcctggcacccactagagagttggctcagcagatacagaaggtagtt
atggccttaggagattacatgggtgcctcgtgccatgcctgcattgggggtaccaatgtg
cgtgctgaggtgcagaagctgcagatggaagctccccatatcatcgtgggtaccccaggt
cgtgtgttcgacatgcttaaccggagatacttgtctcccaaatacatcaagatgtttgta
ctggatgaagctgatgaaatgttaagccgtgggttcaaggaccagatctatgacatattc
caaaagctcaatagcaacacccaggtggttttgctgtcagctacaatgccttccgatgtg
cttgaggtgaccaagaagttcatgagggacccaattaggattcttgtcaagaaagaagag
ttgacgctggagggtatccgccaattctacatcaatgtggaacgagaggagtggaaactg
gacacactgtgtgacttgtatgaaaccctgaccatcacccaggcagtcatcttcatcaac
acccgaaggaaggtggattggctcactgagaaaatgcatgcccgagacttcacggtctct
gccatgcacggagatatggaccaaaaagaacgagacgttatcatgagggagttccgctct
ggctctagcagagtattgattaccactgacctgctggccagaggcatcgatgtgcagcag
gtttccttagtcatcaactatgacctccccaccaacagggaaaactacatccacagaatc
ggtcgaggtggccgttttggccgtaagggtgtggctattaacatggtgacagaagaagac
aagaggactcttcgagacattgagaccttctacaacacctccattgaggagatgcccctc
aatgttgctgacctcatctga
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