Globicephala melas (long-finned pilot whale): 115856025
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Entry
115856025 CDS
T11080
Symbol
SSH2
Name
(RefSeq) protein phosphatase Slingshot homolog 2 isoform X4
KO
K05766
protein phosphatase slingshot [EC:
3.1.3.16
3.1.3.48
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04360
Axon guidance
gmf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115856025 (SSH2)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
115856025 (SSH2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmf01009
]
115856025 (SSH2)
Enzymes [BR:
gmf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
115856025 (SSH2)
3.1.3.48 protein-tyrosine-phosphatase
115856025 (SSH2)
Protein phosphatases and associated proteins [BR:
gmf01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
Slingshots
115856025 (SSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_SSH1-like_1st
DSPc
DEK_C
PTP-SAK
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
115856025
NCBI-ProteinID:
XP_030717786
LinkDB
All DBs
Position
20:complement(5626481..5871899)
Genome browser
AA seq
1449 aa
AA seq
DB search
MALVTVQRSPTPSTTSSPCASSSHLEDSESAALLCCEREESEIFSDSNEADSGEEECRSQ
PRSISESFLTVKGAALFLPRGNGSSTPRISHRRNKHAGDLQQHLQAMFILLRPEDNIRLA
VRLESTYQNRTRYMVVVSTNGRQDTEESIVLGMDFSSNDSSTCTMGLVLPLWSDTLIHLD
GDGGFSVSTDNRVHIFKPVSVQAMWSALQSLHKACEVARMHNYYPGSLFLTWVSYYESHI
NSDQSSVNEWNAMQDVQSHRPDSPALFTDIPTERERTERLIKTKLREIMMQKDLENITSK
EIRTELEMQMVCNLREFKEFIDNEMIVILGQMDSPTQIFEHVFLGSEWNASNLEDLQNRG
VRYILNVTREIDNFFPGVFEYHNIRVYDEEATDLLAYWNDTYKFISKAKKHGSKCLVHCK
MGVSRSASTVIAYAMKEYGWNLDRAYDYVKERRTVTKPNPSFMRQLEEYQGILLASKQRH
NKLWRSHSDSDLSDHHEPICKAGLELNKKEITTSADQIAEVKTMESHPPIPPVFVEHVVP
QDENQKGLCTKERMICLEFTSREFHAGQIEDELNLNDINGCSSGCCLNESKFPLDNCHAS
KALIQPGQDPEMANKFPDLTVEDLETDALKADMNVHLLPMEELTSRLKDLPMSPDPDSPS
PQPSCQAEVSDFSTDRIDFFSALEKFVELSQETRARSFSHSRMEELGGGRSESCRLSVVE
VAPSEATADDQRSSSLSNTPHASEESSIDEEQSKAISELVSPDIFMQSHSENAISVKEIV
TEIESISQGVGQIQVKGDILAIPCHTPKKHIVHELPLERAQAAENKPGNLEQSGVSCTAQ
PELAKDSGKWEPEGCPVAHSSTTALEEEEPAEGEPELWGPGMPPGAKWCPGSVRRATLEF
EERLRQEQEQYGAAPACASLSTRKNSKNDSSSVADVASKGRSDEATLEHAFVPREPETSK
GKGKCSGSEAGSLPHSEQHAIVPAPELPESHPLPAPQKCPGSGPRTQQEGVLKEQRTSVS
CQGPETPAVPLPLPKKIEIVEYTHTVTTPDHGPEGETATSEKSGEQGLRKVKVEESVTVL
CALDENLNRTLSPDQASLHPRALPLPHSSSPEPEHGRPAHPAPTLSSPGDGGNSPAAALE
TAAPSVSHSAHVLGASLAYLHPQTVVHLEGFTEQSSTTDNEPSAEKGSWEESQEGPLSRG
SGVPYQGSQVSSEDLCLISRLGDSVGEQQEKLDPSPVACQLPHSPSSDGIKGLSHSPSGV
KERAKEIESQEISQVGLPKPSQMRHSASLAKLGYLDLCKDCLPERGPICSESPHLKLLQP
FLRMGSGMEAQEPPENPDAPQNLEPTKWFIEQLKTTECIAQSKPVERPLVQYAKEFGSSQ
QCLLPRAGPELTSSEGGLPLVQTQGLQGAGPAPGLAVVPRQQHGRTHPLRRLKKANDKKR
TTNPFYNTM
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggctttggtcacagtccagcggtcgcctacccccagcactacctccagcccctgcgcc
tcgagctctcatttggaagacagtgaatccgcagcattactttgctgtgaacgtgaagaa
tcagaaatctttagtgattccaatgaggcagacagtggggaggaggaatgccgatcacag
cccaggagcatcagcgagagctttctaacggtcaaaggtgctgccctttttctgccacgg
ggaaatggctcatccacaccaagaatcagccacagacgcaataagcatgcaggtgacctc
caacagcatctccaagcaatgttcatattactccgcccagaagacaacatcaggctggct
gtaaggctagaaagtacttaccagaatcgaacacgctatatggtagtggtttcaactaac
ggtagacaagacactgaagaaagcatcgtcctaggaatggatttctcctctaatgacagt
agcacttgtaccatgggtttagtcctgcctctctggagtgacaccctaattcatttggat
ggtgatggtgggttcagcgtatcaacagataacagagttcacatattcaaacctgtgtct
gtgcaggcaatgtggtctgcattacagagtctacacaaggcttgtgaagtcgccagaatg
cataactactaccctggcagcctgtttctcacctgggtgagttattacgagagccatatc
aactcagatcaatcctcagtcaatgaatggaatgctatgcaggatgtgcagtcccaccgg
cctgactctccagctcttttcacagacataccaactgaacgtgagcgaacagaaaggcta
attaaaaccaaattaagggagattatgatgcagaaggatttggagaatatcacatccaaa
gagatacgaactgaattggaaatgcaaatggtgtgcaacttgcgagaattcaaggaattt
atagataatgaaatgatagtgatccttggtcagatggatagccctacacagatatttgag
cacgtgttcttgggctcggaatggaatgcctctaacttagaggatttacagaaccgaggg
gtgcgatatatcttgaatgtcactcgagagatagataacttcttcccaggagtctttgag
tatcacaacattcgggtatatgacgaagaggcaacggatctcctggcttactggaatgac
acttacaaattcatctctaaagcaaagaaacatggatctaaatgccttgtgcactgcaaa
atgggggtgagtcgctcagcctccactgtgattgcctatgcgatgaaggagtatggctgg
aatctggaccgagcctatgactacgtgaaggaaagacgaacagtgaccaagcccaacccc
agcttcatgagacagctggaagagtaccaggggatcttgctggcaagcaaacagcggcat
aacaagctctggcgatctcattcagatagtgacctctcggaccaccacgaacccatctgc
aaagcaggactagaactcaacaagaaggagatcaccacctcagcagaccagattgccgag
gtcaagaccatggagagtcacccacccatacctcccgtcttcgtggaacatgtcgtccca
caggatgaaaatcagaaaggcctgtgtaccaaagaaagaatgatctgcttggagtttact
tctagggaatttcatgccggacagattgaagatgaattaaacctaaatgacatcaatgga
tgctcatcagggtgttgtctcaatgaatcaaaattccctcttgacaactgccatgcatcc
aaagccttaatccaacctggacaggacccagaaatggccaacaagttcccagacttaaca
gtggaagatttggagacagacgcactgaaagcagacatgaacgtccacttactgcccatg
gaagaattgacatcccgcctgaaagatctccccatgtcccctgatcctgactcaccgagc
ccccaacccagttgccaggctgaagtctcagatttcagtacagatcgcattgactttttt
agcgcgctagagaagtttgtagagctttcccaagaaacccgggcccgatctttttctcac
tcaaggatggaggaactgggtggaggaaggagcgagagctgtcgactgtcagtggtcgaa
gtagccccttccgaagcgaccgctgatgaccagagaagcagctctctgagtaatactccc
catgcatctgaagaatcttcaatagatgaggaacagtcaaaggcaatctcagaactggtc
agtccagacatcttcatgcagtctcactcagaaaatgcaatttcagtcaaagaaatcgtc
actgagattgaatccatcagtcaaggagttggacagattcaagtgaaaggcgacatccta
gccattccatgccatacaccaaagaagcacatcgtccatgagctgccccttgagagggcc
caagccgcagagaacaaacctggaaatctggagcagagtggagtttcctgcacagcccag
cctgaactagccaaagactcagggaagtgggagccagaagggtgcccagtggcacactca
tccaccacagcgttggaagaagaggaaccagctgagggggaaccagagctctggggccca
gggatgcccccgggtgccaagtggtgccccgggtccgtgaggcgagccaccttggagttt
gaggagcgcttgcggcaggagcaggagcagtacggtgctgcccctgcttgtgcctcgttg
tccactcgtaagaattccaagaatgattcttcttctgtggcagatgtggcatcaaaaggg
aggagtgatgaagccaccctagaacatgcatttgtccccagggaaccagagacgagcaag
ggcaaagggaaatgcagtgggtctgaggctggctccctaccccattctgagcagcatgcc
atcgttccagcacccgagctgccggagtctcacccgttgccagctcctcagaagtgccca
gggtcaggtcccagaacacagcaggaaggagtcctgaaggagcagaggacttcggtctca
tgccagggacctgagacaccagcagtccctctgcctcttcccaagaagatagaaatcgtt
gaatacacccacacagtcacgacacctgatcacgggccagagggggaaacagccaccagc
gaaaagagtggggagcagggactgaggaaagtgaaagtggaggagtccgttactgtcctc
tgtgcactggatgaaaatctgaaccggacactgagccccgaccaggcttctctgcacccc
agagcgctacctctgcctcactcttcctctcccgagcctgagcacggcaggcccgcccac
ccagcccccaccctgagcagccctggagacgggggcaacagcccagcagctgccctggag
acggcagcgccttctgtcagtcactcagcccacgtacttggtgccagcttggcttacctg
catccccagacggtggttcacctggaaggcttcacagagcaaagcagcaccacagacaat
gagccctctgcggagaagggcagctgggaggaaagtcaggagggccccctctccaggggc
agtggagtgccatatcagggctcccaggtaagtagcgaagacctgtgtttaattagcaga
ctcggtgacagtgttggggagcagcaagaaaaactggacccatcacctgtagcctgtcag
ctcccacacagccctagtagtgacggtataaagggtctcagtcacagccccagtggggtg
aaggaacgcgctaaagaaatcgagtcccaagagatttcccaggtagggctccccaaacca
tcgcaaatgaggcattcagcttccctcgccaagttaggttacctggacctctgtaaagac
tgtttaccggagagggggcctatctgctctgagtcccctcatctcaaactgcttcagccc
ttcctcagaatgggctcgggaatggaggcccaggagcccccagaaaacccagatgctccc
cagaacctagagcccaccaagtggttcatagagcaactcaaaacaacagagtgtatcgca
cagagcaagccggtggagaggccccttgtacagtatgccaaagaatttggttccagtcag
cagtgtttgctccccagggcaggacctgaattgactagttctgaaggaggccttcctttg
gtacagacccagggactgcagggtgcaggcccagctccagggctggctgtagtgccccgt
cagcagcacggcagaactcaccccctaaggagactgaaaaaagcaaatgataaaaaacgg
acaaccaaccccttctataataccatgtga
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integrated database retrieval system
