Globicephala melas (long-finned pilot whale): 115856305
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Entry
115856305 CDS
T11080
Symbol
DDX21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gmf03009
]
115856305 (DDX21)
03036 Chromosome and associated proteins [BR:
gmf03036
]
115856305 (DDX21)
Enzymes [BR:
gmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115856305 (DDX21)
Ribosome biogenesis [BR:
gmf03009
]
Eukaryotic type
Pre-60S particles
Helicases
115856305 (DDX21)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
115856305 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
DD_DDX21-DDX50
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
115856305
NCBI-ProteinID:
XP_030718284
LinkDB
All DBs
Position
16:complement(62838607..62862795)
Genome browser
AA seq
785 aa
AA seq
DB search
MPGKLLSEADLESDTAMAKVEMPRKRNEKKGKKEKPKSNKTEEAAEEKDETISPKAKKVK
KKAGPFEADMSSPKSKKAKKKEEPSQDDIISPKTKSAKKSKEPREKTVVSPKTKKLIKNE
EPSENDLGVPKSKKMKKEKEMNGEIGEKSPNLKNGFPHSGPDSDSKEAASEESNSELEQE
ITVEQKEGAFSNFPISEETIKLLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTF
SFAIPLVEKLQGELQDRKRGRAPQVLVLTPTRELAGQVSRDFSDITKKLAVACFYGGTPY
GGQIERMRNGIDILVGTPGRIKDHLQNGKLELTKLKHVVLDEVDQMLDMGFADQVEEILC
VAYKKDSEDNPQTLLFSATCPHWVYNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKC
HWTQRAAVIGDVIRVYSGYQGRTIIFCETKKEAQELSQNVSIRQDAQSLHGDIPQKQREI
TLKGFRNGDFGVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGRTGICI
CFYQHKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAIVHFKQSA
EKLIEEKGAVEALAAALAHISGATSVNQRSLINSDVGFVTMILQCSIEMPNISYAWKELK
EQLGEDIDSKVKGMVFLKGKQGVCFDIPTASVTEVQEKWHDSRRWQLSVATEQPELEGPR
EGYRSFRGQREGNRSFRGQREGNRGLRGQRERNRSFRGQQSGGGNKSNRFQNKGQKRNFS
KAFGQ
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaaacttcttagtgaagcggatttggagtcggacacggccatggcgaaagtg
gagatgccgcgaaagcgaaatgagaagaaaggtaaaaaagagaagccaaaatctaataag
actgaagaggcagcagaagaaaaggacgaaacgatttctcccaaagctaaaaaggttaaa
aagaaagcagggccttttgaggctgacatgagttctcctaaatccaaaaaggcaaaaaag
aaagaggagccatctcaagatgacattatttctcctaagaccaaaagtgcgaaaaaatca
aaggagccccgtgaaaagacagttgtttctcctaaaaccaaaaaactaataaaaaatgag
gagccttctgagaatgacttgggtgtgcctaagtccaagaagatgaagaaagaaaaagaa
atgaatggagaaattggagagaaaagccccaacctgaagaatggattccctcattctgga
cctgactccgactccaaggaagctgccagtgaagaaagtaacagtgagttagagcaggaa
ataactgtggagcaaaaagaaggagctttctctaattttcccatatctgaagaaactatt
aaacttctcaaagcccgtggggtgaccttcctgtttcctatacaagcaaagacgtttcac
cacgtctatagtgggaaggacttgattgcacaggcacggacaggaactgggaagacattc
tcctttgctatccctttggttgagaaacttcagggagaactgcaagaccggaagagaggc
cgtgcccctcaggtactggttcttacacccacaagggagttggcaggtcaagtaagcaga
gatttcagtgacatcacaaaaaaactggcagtggcttgtttttatggtggaactccctac
ggaggacaaattgaacgcatgcggaatgggattgatatcctggttgggacaccaggtcgt
atcaaagaccacctgcagaatggcaagctagagctcaccaaacttaagcatgttgtcctg
gatgaagttgaccagatgttggacatgggctttgctgatcaagtggaagagattttatgt
gtggcatacaagaaagattcagaagacaatccccaaacattgcttttttctgcaacttgc
cctcattgggtttataatgttgctaagaaatacatgaaatctacatatgaacaagtggac
ctgattggtaaaaagacccagaaaacggcaataactgtagagcatctggctatcaagtgc
cactggactcaaagggcagcagttattggggacgtgatccgagtgtacagtggttatcaa
gggcgcactatcatcttctgtgaaaccaagaaagaagcccaggagttgtcacagaatgtg
tccataaggcaggatgcccagtcattacacggagacattccacagaagcaaagggaaatc
accctgaagggttttagaaatggtgattttggagttttggttgcaaccaatgtcgctgca
cgtgggttagacatccccgaggttgatctggttgtacagagttctccaccaaaggatgtg
gagtcctacattcatcgttctggacgaacaggtagagctggaaggactgggatttgcatc
tgcttttatcagcacaaggaagaatatcagttagcccaagtggagcaaaaagcgggaatt
aaatttaagagaataggtgttccttctgcaacagagataataaaagcttctagcaaagat
gccatcaggcttttggattctgtgcctcccactgcgattgttcacttcaagcagtcagcc
gagaagctgatcgaggagaagggagccgtggaagccctggcagcagccctggcccatatt
tcaggtgccacgtcagtcaaccagcgctccttgatcaactcagatgtgggttttgtgacc
atgatcttgcagtgctcaatagaaatgccaaatattagttatgcttggaaagaacttaaa
gagcagctgggtgaggatattgattccaaagtgaagggaatggtctttctcaaaggaaag
cagggtgtttgctttgatatccctactgcatcagtaacagaagtacaggaaaaatggcat
gattcacggcgctggcagctttctgtggccacagagcaaccagagctagaaggaccacgg
gaaggatatcgaagcttcaggggacagcgggaaggaaacagaagcttcaggggacagcgg
gaaggcaatcgaggtctcaggggacagcgggaaagaaatagaagcttcagaggacagcaa
tcaggaggtggcaacaaaagtaacagattccaaaacaaaggccagaagcggaattttagt
aaagcattcggacagtaa
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