Globicephala melas (long-finned pilot whale): 115856453
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Entry
115856453 CDS
T11080
Symbol
CDHR1
Name
(RefSeq) cadherin-related family member 1 isoform X1
KO
K16501
cadherin-related family member 1
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmf04515
]
115856453 (CDHR1)
Cell adhesion molecules [BR:
gmf04515
]
Cadherins
Cadherin related
115856453 (CDHR1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
VWA_3_C
Motif
Other DBs
NCBI-GeneID:
115856453
NCBI-ProteinID:
XP_030718642
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Position
16:complement(50299050..50320064)
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AA seq
912 aa
AA seq
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MVRVPDKPSPAGAHGRRWPRAPVGALGSGTGALACPRVGQTRDHAGAELSLRVFGCPLFC
VLFLAQANFAPYFFDNGVGSTNGNMALFSLPEDTPVGSHVYTLNGTDPEGDPVSYHISFD
PSARSVFSVDPNFGNITLIEELDREREDEIEAIVSISDGLNLVAEKVTILVTDANDEAPR
FIQEPYIVQVPEDTPAGSSIAKVRAVDRDTGSGGSVTYFLKNPHSTKFSVDRHSGVLRLQ
AGATLDYEKAPAHFIAVVAKDGGGRLRGASVVLSATTTVTVNVEDVQDMAPVFVGTPYYG
YVYEDTLPGSEVLTVVAMDGDRGKPNRVLYSFVNGSDGAFEINETSGAISITQSPAQLRR
EAYELHVQVTEVSSAGTPAAQAMAPVTIRIVDLNNHPPTFYGESGPQNRFELSMYEHPPQ
GEILRGLKITVNDSDQGANAKFNLRLVGPGGIFRVVPQTVLNEAQVTIIVENSATIDFEK
FKVLTFKLLAIEVNTPEKFSSTADIVIQLLDTNDNVPKFTSHYYIARIPENAPGGSNVLA
VTAVDPDTGPWGEVKYSIYGSGADLFLIHPSSGIIYTQPWASLDAEDTARYNFYVKAEDM
EGRYSLAEVFVTLLDVNDHYPQFGKSVQEKTMVLGTPVKIEATDQDAEEPNNLVDYSIIH
AEPANVFDIDMHTGEIRLKNSIRSLDALHNITPSGDHTWSLEVQAKDRGSPSFSTTALLK
IDVVDTEMLSRNPMAAFLMQTKDNPMKAVGVLAGIMAIIVAITVLISTATFWRNKKSNKV
LPVRRVLRKRPSPAPRTAGVKWLKFRRTKAADRFVLREDPPNENCNNNSLGSAPPPKVPA
PPPPPSTTPSMGPAHWMVPTVSGSLAPQQLHPSPKPKALAEHEAAGRPVQSALVSELRQK
FEKKNVHNEAYF
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgtccctgacaagccgagcccagccggagcccacgggaggaggtggccgagg
gccccggtgggcgcgctgggctctgggacgggagccctcgcctgcccgcgggtgggccag
acgcgcgaccacgccggtgccgagctgtccctgcgcgtgttcgggtgtcctctgttctgt
gttctcttcctagcccaggccaacttcgccccctactttttcgacaacggggtgggcagc
accaacggaaacatggccctcttcagcctcccggaggacactcctgtgggctctcatgtg
tacaccctgaatggaacagaccccgagggagaccccgtctcctaccacatcagctttgac
cccagcgctagaagtgtcttttcggttgaccccaattttggaaacataaccctgattgaa
gagctggacagagagagggaggacgagattgaagccattgtcagcatttccgacggcctg
aatctggtggcggaaaaagtcactatcctggtgacggatgccaatgacgaggcacccagg
ttcatccaggagccctacattgtccaggttcccgaggacacacctgctgggagcagtatt
gccaaggtccgtgcagtggacagggacacaggttctggagggagtgtcacctacttcctg
aagaatccacactccaccaagttttctgtggaccgccacagtggtgtactccgcctccag
gctggggccaccctggactacgagaaggccccggcccacttcattgctgtggttgccaag
gatggcggagggaggctgcgaggggccagtgtggtgctctcggccaccaccacggtcaca
gtcaacgtggaggacgtgcaggacatggcccctgtcttcgtgggcacgccctactacggc
tatgtgtacgaggacacccttccgggctcagaggtcctgaccgtcgtcgccatggatgga
gatcgcggcaaacccaaccgtgttctctacagcttcgtgaacggcagtgatggagccttt
gaaattaatgagacgtctggagcaatctccatcacccagagccctgcccagctccggaga
gaggcgtatgagctgcatgtacaggtgactgaggtcagctctgcagggaccccagctgcc
caggccatggcccctgtcaccatccggattgtggacctcaacaaccatccgccgacattc
tatggagagagtggaccccagaacagatttgagctgtccatgtatgagcacccgccccag
ggggagatcctgcggggcctcaagatcactgtcaacgactcagaccagggagccaatgcc
aaattcaacctgcggctggtgggacccgggggcatcttccgagtggtcccccagacggtc
ctgaatgaagcccaagtgacgatcattgtagagaactcagccaccattgactttgaaaag
ttcaaagtgttaaccttcaagctcctggccatcgaagtgaacaccccagagaagttcagc
tccacagcggacatcgtgatccagctcctggacaccaatgacaatgtccccaagttcacg
tcccactactacattgccaggatccccgagaatgccccagggggctccaacgtgttggct
gtcacagccgtcgatccggacacaggtccctggggtgaagtcaaatactccatctatgga
tccggggcagacctcttcctgatccacccatcctctgggatcatctacacccagccctgg
gccagcctggacgccgaggacactgccaggtacaacttctacgtgaaggcagaggacatg
gagggcaggtacagcctagccgaggtgttcgtcacgctgctggatgtcaatgaccactac
ccccagtttggaaagagcgtccaggagaagacaatggtgctggggaccccagtgaaaatt
gaggccacagaccaggacgcagaggagcccaacaacctggtagactattccatcatccac
gcagagccagccaacgtgttcgacatcgatatgcacacgggggagatccggctcaagaac
tccatccgctccctggatgccctgcacaacatcacgcccagcggggaccacacgtggtcg
ctagaggtgcaggccaaggaccgcggctccccatccttcagcaccacggccttactcaag
attgacgtcgtagacactgagatgctgtcccgaaaccccatggctgccttcctgatgcag
accaaagacaaccccatgaaggccgtgggtgtgctggccggcatcatggccattattgtg
gccataaccgtcctcatctccaccgccaccttctggcgcaacaagaagtccaacaaggtc
ctgccggtgcggcgtgtgctccgcaagcggcccagccctgcaccccgcaccgccggcgtc
aagtggctcaagttcagaaggaccaaggccgctgacaggtttgtgctcagagaggatcct
cccaatgagaactgcaacaacaacagcctgggaagtgcaccgccccccaaagtccccgct
ccccctccaccacccagcacgacgcccagcatgggaccagcccattggatggtgcctaca
gtctctggctccctcgcccctcagcaactccatccatcaccaaaacccaaggccttggcg
gaacacgaggctgcgggaagacccgtccagtcagctctggtctctgagctcaggcaaaag
tttgagaagaagaatgtgcataacgaggcttacttctag
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