Globicephala melas (long-finned pilot whale): 115856462
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Entry
115856462 CDS
T11080
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X2
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115856462 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gmf04990
]
115856462 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
gmf04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
115856462 (LDB3)
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Ortholog
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GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
PDZ_2
LIM_FHL2-3_N
DUF3854
Motif
Other DBs
NCBI-GeneID:
115856462
NCBI-ProteinID:
XP_030718664
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All DBs
Position
16:complement(48212022..48271869)
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AA seq
653 aa
AA seq
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MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSPGDLVVAIDGVNTDTM
THLEAQNKIKSASYNLSLTLQKSKRPILISTAAPPIQSPLPVIPHQKDPALDTNSSLAAP
SPNPEARAIPGTPGNLELGQTLSSSFSQTSVFSSHTEASDAGPPWGSPGAKVNLEGALDS
LSPKAPRGSSQPRQYNNPVGLYSAETLREMAQLYQMSLQGKASGAGLLGGSLPVKDLTVD
STSPVYQAVIKNQNKPEDEADDWARRSSSLQSRSFRILAQMTGTEYMQDPDEEALRRSRP
QASAYSPAVATSPAPAAHTYSEAPAAPAPKPRVVTTASIRPSVYQPVPASTYSPSPGANY
SPAPYTSSPAPAYTPSPAPAYSPSPAPAYTPSPAPSYNPAPYSGGPAESASRPPWVTDDS
FSQKFAPGKSTTTVSKQGLPRGAPAYSAPPAPQVSPLARGTVQRAERFPASSRTPLCGHC
NSIIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPVCAKCN
TKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDF
PVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagcgtgaccctgaccgggcctgggccctggggcttccgtctgcaggggggc
aaggacttcaacatgccactcaccatatcccggatcacaccgggcagcaaggccgcccag
tcccagctcagcccgggtgaccttgtggtggccattgacggcgtcaacacagataccatg
acccacctggaggcccagaacaagatcaagtctgccagctacaacctgagtctcacgctg
cagaagtcaaagcgtcccattctcatctccacggcagcgcccccgatccagtcccctctg
cctgtgatcccccaccaaaaggaccctgctctggacacgaacagcagcctggcagcaccc
agccccaaccccgaggcgagggccatcccgggcaccccaggcaacctggagctcgggcag
acccttagctcctccttctctcagacctccgtcttctcctcacacacggaggcctctgac
gctggccctccatggggcagcccgggggccaaggtcaacctggagggggccctcgactct
ctaagcccgaaagccccgcggggttcgagccagccaaggcagtataacaaccccgttggc
ctgtactcggcagagaccctgagggagatggctcagctgtatcagatgagcctccaaggg
aaggcctcaggtgctggactcctaggagggagccttcctgtcaaagacctcaccgtagac
agcacctctcccgtgtatcaggctgtgattaagaaccagaacaagccggaagacgaggct
gacgactgggcccgccgctcctccagcctgcagtctcgctccttccgcatcctggcccag
atgacggggacagaatatatgcaagaccctgatgaagaagctttgcgaaggtcaaggccc
caggcctctgcctacagtcccgccgtggccacctctccagcacctgccgcccatacatac
agcgaggccccagctgcccctgcacccaagccccgggttgtcaccactgccagtatccgg
ccttctgtctaccagccagtgcctgcatctacctacagcccatccccaggggccaattac
agtccagccccctacacctcctcccctgcccccgcgtacaccccttcccctgcccccgcc
tactccccctccccagcaccagcctataccccctcgccagccccaagctataatcctgca
ccctacagcgggggccctgcggagtctgccagccgtcccccatgggtgacagacgacagc
ttctctcagaagtttgcccctggcaagagcaccaccactgtcagcaagcaaggcctgccc
cgaggggcccctgcctacagcgcaccaccggctccgcaggtgtccccccttgccaggggt
accgtgcagagggcggagcgcttcccagccagcagcaggactccgctctgtggccactgc
aacagcatcatccggggcccctttctggtagccatgggccgctcctggcacccagaagag
ttcaactgtgcctactgcaagacctccctggcagatgtgtgctttgtggaggagcagaac
aacgtttactgtgagcggtgttatgagcagttctttgccccggtctgtgccaagtgcaac
accaaaatcatgggggaagtgatgcatgccttgagacagacgtggcacaccacctgcttt
gtctgtgcagcctgcaagaagcccttcgggaacagcctcttccacatggaagatggggag
ccctactgtgagaaagactatatcaatctgttcagcaccaagtgtcacggttgcgatttc
cccgttgaggccggtgacaagtttatcgaagccctggggcatacttggcacgacacctgc
ttcatttgcgcagtctgccacgtgaatctggaggggcagccattctactccaagaaggac
aaacccttgtgcaagaagcatgcacacgccatcaacgtgtag
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