Globicephala melas (long-finned pilot whale): 115856819
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Entry
115856819 CDS
T11080
Symbol
RFWD3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmf04121
]
115856819 (RFWD3)
Enzymes [BR:
gmf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115856819 (RFWD3)
Ubiquitin system [BR:
gmf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115856819 (RFWD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
Beta-prop_WDR5
zf-C3HC4
zf-RING_UBOX
Beta-prop_THOC3
WD40_CDC20-Fz
WDR55
zf-C3HC4_2
EIF3I
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
zf-C3HC4_3
zf-RING_5
zf-rbx1
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
zf-RING_11
WD40
Beta-prop_WDR36-Utp21_2nd
Rtf2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Nairovirus_Gn
zf-C3HC4_4
Beta-prop_ACSF4
Beta-prop_RIG_2nd
zf-ANAPC11
ANAPC4_WD40
zf-RING_Vps41
zf-Nse
zf-UDP
zf-RING_4
Syntaxin-18_N
Motif
Other DBs
NCBI-GeneID:
115856819
NCBI-ProteinID:
XP_030719222
LinkDB
All DBs
Position
19:complement(49993428..50037565)
Genome browser
AA seq
796 aa
AA seq
DB search
MAHEAMKYDLQVQLDHGAAQQPAPPEVVSGQGGPPLLQPSHTEVVSSQEGPPLFEPAPAA
VVSSQGGPALLQPPPDEVVSSQEGLPRLQAAPQVSIDMTEELSGEETVENINPGVSEESR
QESGANHTAQVSSLDPVNSFISGLQRLHGMLEFLRPTSDHRVGPVRARRRSSASQRARAG
GSHRTNSARLRSPLDAYFQVSRTQPHSPATSYGSETRNPVSEDLQVSGSSDSDSSTEYEE
GVVQAEEPRAVVLEEQLGGNDLAEQLGDISTEQEVTCIGGGETLPKQQSPQKSNPLLASA
SVDEEEADTCTICLEQWTNAGDHRLSALRCGHLFGYKCISKWLKGQARKCPQCNKKAKHS
DIVVLYARTLRALDTSEQELTKSSLEEEKMLRKKAELESAQCRLQLQVLTEECTKLHSHV
QDLKKLIVQHQSEISQLTGSSQARFLSSLSSSQSQHKYHFQKAFTVSQTGNCRVMTYSDA
LSCLVVSQPSPQASFLPGFGVKMLSTANMKSSQYIPVHGKQIRGLAFSSRSKGLLLSASL
DNTIKLTSLETNTVVQTYNTGRPVWSCCWCLDENNYMYAGLVNGSILLYDLRNTSSHIQE
LAPQKARCPLVSLSYIPRAASAAFPYGGLLAGSLENASFWELKMGFTHWPHVLPMEPGGC
IDFQTESSSRHCLVTYRPDKNHKTLRSVLMEMSYKLDNAGEPICSCNSVQTFRGGPTCKL
LTKSAIFQNPENDGSILVCTGDEMSNSALLWDAGSGSLLQELQANQPVLDICPFQVNHNS
YLATLTEKMVHIHRWE
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggctcatgaagcaatgaaatatgatcttcaggtgcagttagatcatggtgctgcacag
cagcctgctcctcctgaagtggtcagcggccaaggtggaccacccctgctccagccttct
catactgaggtggtcagcagccaggaaggaccacccctgtttgagcctgcacctgctgca
gtggtcagcagccaagggggaccagccctgctccagccccctcctgatgaagtggtcagc
agccaagagggactgccccggcttcaggctgctccacaggtgtccattgatatgacagag
gagctctcaggagaagagactgtggagaacatcaatccaggagtttcagaggagagtagg
caggaatctggtgctaaccacacggcccaagtatcttcattggatccagtgaacagcttc
atcagtgggctgcagagacttcatggcatgctggaattcctgagaccaacttcggaccac
agggtggggccagtgagagctagaaggaggagttctgcttcacagagggcaagagctgga
gggtctcacaggacaaacagtgccaggttgagatcaccgctggatgcttactttcaagtg
agcaggacgcagcctcattctccagccacctcttatggttcagagactaggaatcctgtc
tctgaagacttgcaggtatcaggtagttctgacagtgacagctccacagagtatgaagag
ggagttgtccaggcagaggaacctagagctgttgttttagaagagcaactaggaggtaac
gacttggcagagcaactcggagatatctcaacagagcaagaagttacatgtattggtgga
ggagagactctccccaaacagcagtctccccagaagtctaatcctcttctagcttctgct
tctgtggatgaggaagaagcggacacttgcacaatatgtttggaacagtggaccaatgct
ggggatcaccggctctcggcattgcgctgtgggcacctctttgggtataagtgtatttct
aagtggctcaaaggacaggcacgaaaatgtcctcagtgcaacaagaaagccaagcacagt
gacatcgttgtcctttatgcccgaaccctgagagctttggacactagtgaacaggagctc
acaaaaagttccttagaagaggagaagatgctaaggaagaaggctgagttagaatcggca
cagtgccggctccagcttcaagtcctcactgaggaatgcactaagcttcacagtcatgtt
caggacttgaaaaaacttattgtgcagcatcagagtgagatttcacagctgaccgggagt
tcccaagcacgtttcctaagcagcctgtcctccagccagagccaacacaagtaccatttc
cagaaggcattcacagtgtctcaaacaggaaactgccgagtcatgacatactctgatgct
ctgagctgcctggtagtatcacagccttctcctcaggcctccttccttccaggctttggt
gttaagatgttgagtactgccaacatgaaaagcagtcagtatattcccgtgcatggcaaa
cagatacgtggactggctttcagcagtcgatccaaaggcttacttctctctgcttcccta
gacaacactattaaactgaccagcctggagacaaatactgtggtccagacttacaatact
ggacgtcctgtctggagctgctgctggtgtcttgatgaaaacaattacatgtatgctgga
ttggtcaacggttcaattctgctgtatgaccttcgaaacacaagctctcatatccaggag
ttagcacctcagaaagctagatgcccgctggtatctctgtcatacatacccagagctgcc
tcggctgcatttccatatggtgggctgttggctggaagcttggagaatgcttccttttgg
gagctgaaaatgggctttactcattggcctcatgtgctgcccatggagcctgggggctgc
atagactttcagacagagagcagcagccggcactgtcttgtgacctacaggcctgataaa
aatcacaaaaccttacgaagtgtactcatggagatgtcctataagctggataatgctgga
gagccaatctgttcctgcaattctgtacaaacattccgtgggggacccacttgcaaacta
ctgaccaaaagtgccattttccaaaatccagagaatgatggcagcatcctggtgtgtact
ggggatgaaatgtcaaattctgccctgctgtgggatgctggcagtggctcgttgctgcag
gaactgcaggctaatcagcctgtcttggacatctgcccatttcaggtgaaccataacagc
tacttggctaccttaacggagaagatggtccacatccatagatgggagtga
DBGET
integrated database retrieval system
