Globicephala melas (long-finned pilot whale): 115856831
Help
Entry
115856831 CDS
T11080
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03013
Nucleocytoplasmic transport
gmf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115856831
03015 mRNA surveillance pathway
115856831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115856831
Enzymes [BR:
gmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115856831
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115856831
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
115856831
NCBI-ProteinID:
XP_030719260
LinkDB
All DBs
Position
19:complement(49630546..49654880)
Genome browser
AA seq
484 aa
AA seq
DB search
MAGAASPFRGRAVGRFPLALPVGDFSNLHLKEEKIKPDANGAVVKTNANAEKSDEEEKED
RAAQSLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRP
SKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANRYPQCLCLSPTYELA
LQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEHIVIGTPGTVLDWCSKLKFIDPKK
IKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNII
KLKREEETLDTIKQYYVLCNSRDEKFQALCNIYGAITIAQAMIFCHTRKTASWLAAELSK
EGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKD
GNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIE
KIAN
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctggggctgctagcccgttccgaggtcgcgccgtagggcgctttccgctcgccctg
cctgtgggcgacttcagcaacttgcatcttaaggaagagaaaatcaaaccagatgccaat
ggtgctgtggtcaagaccaatgctaatgcagagaagtcagatgaagaagagaaagaggac
agagccgcccagtccttactcaacaagctgatcagaagcaaccttgttgataacaccaac
caagtggaagtcctgcagcgggatccaaactccccgctctactcagtgaagtccttcgag
gagcttcggctgaaaccacagcttctccagggagtctacgccatgggcttcaaccgtcca
tcgaagatacaggagaatgcattgcctttaatgcttgctgagcccccacagaacttaata
gcccagtctcagtctggtactggtaaaacagctgcctttgtgttggccatgctcagccaa
gtagaacctgcaaacagatacccccagtgtctgtgcctctccccaacttacgagctcgct
cttcaaacgggaaaagtgattgagcagatgggcaaattttaccctgaactgaagctagcg
tatgctgttcgtggcaataaattggaaagaggtcagaagatcagtgagcacattgtcatt
ggcacccctgggaccgttctggactggtgctccaagctcaagttcattgaccccaagaag
atcaaggtgtttgttctggatgaggctgacgtgatgatagctactcagggccaccaagat
cagagcatccgcatccagaggatgcttcccaggaactgccagatgctgcttttctctgcc
accttcgaagactctgtctggaaatttgcccagaaagtggtcccagacccaaacatcatc
aaactgaagcgcgaggaggagacactggacaccatcaagcagtattacgtcctgtgcaat
agcagagatgagaagttccaggccttgtgtaatatctacggggccatcaccattgctcaa
gccatgatcttctgtcatacccgcaaaacagctagttggctggcagcagagctctcaaaa
gaaggccaccaggtggctctgctgagtggtgaaatggtggtggagcagagggctgcagtg
attgagcgcttccgagagggcaaagagaaggttctggtcaccaccaacgtgtgtgcccgc
ggtatcgatgtggaacaggtgtctgtcgtcatcaactttgaccttcccgtggacaaggat
gggaacccggacaacgagacctacctgcaccggatcgggcgcaccggccgctttggcaag
aggggcctggccgtgaacatggtggacagcaagcacagcatgaacatcctgaacagaatc
caggagcatttcaataagaaaatagaaagactggacacagatgacttggacgagattgag
aaaatagccaactga
DBGET
integrated database retrieval system
