Globicephala melas (long-finned pilot whale): 115857272
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Entry
115857272 CDS
T11080
Symbol
STX18
Name
(RefSeq) syntaxin-18 isoform X1
KO
K08492
syntaxin 18
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04130
SNARE interactions in vesicular transport
gmf04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
115857272 (STX18)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115857272 (STX18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115857272 (STX18)
Membrane trafficking [BR:
gmf04131
]
SNARE
Syntaxin (Qa)
Stx-rER
115857272 (STX18)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
DUF6279
Phage_CP76
Med11
TipAS
DUF4559
DUF6176
Phage_TAC_3
NET2A
Motif
Other DBs
NCBI-GeneID:
115857272
NCBI-ProteinID:
XP_030720053
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Position
5:37232428..37355077
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AA seq
335 aa
AA seq
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MAVDITLLFRASVKTVKTRNKALGVAVGGGVEGSRDELFRRSPRPKGDFSSRAREVISHI
GKLRDFLLEHRKDYINAYSHVMSEYGRMTDTERDQIDQDAQTFMRTCSEAIQQLRTQAHK
EIHSQQVKEHRSAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPNTKTRQS
MSSEKVSQNPSKDSEERPVTEEFPEKIPAEAQPELGTWGDGKGEDELSPEEIQMFEQENQ
RLIGEMNSLFDEVRQIEGKVVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNE
DIREAIKNNAGFRVWVLFFLVMCSFSLLFLDWYDS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggacatcacactgctgttccgggccagcgtcaagaccgtgaagacgcgcaac
aaagcgctgggagtggcagtgggcggcggggtcgagggcagccgcgacgagctgttccgc
cggagcccccggcctaagggcgacttctccagccgggcgcgcgaagtgatttcacacatt
ggcaaactgagagattttcttctcgaacacaggaaagattatattaatgcttatagccat
gtcatgtctgaatatgggagaatgacggacacagaacgagaccagatagaccaggatgct
cagacattcatgaggacctgctcagaagcgatccagcagctgagaacacaagcccacaag
gagatacattcccagcaagtgaaggagcacaggagtgctgttttggatttcattgaagat
tacttaaaaagagtatgtaaactttactcagaacaaagagccatccgagttaagcgagtg
gtggacaagaaaagattatctaagctggaaccagaaccaaatacaaagacaagacaatcc
atgtcttctgagaaagtttcacagaatccttcaaaagactctgaagaaagacctgtcact
gaagaatttccagaaaagattccggccgaagcacaacctgaattgggaacctggggagat
gggaaaggtgaagatgaattatccccagaagaaatacaaatgttcgaacaagaaaatcag
cgcctgattggtgaaatgaacagcctgtttgacgaagtgaggcaaatcgaagggaaagtg
gttgaaatttccagactccaagagatattcacagagaaggttttacaacaagaagctgag
attgacagtattcaccaattagtagtaggagcaactgagaatatcaaggagggcaatgaa
gacatcagagaggccatcaagaacaacgctggcttccgcgtgtgggtgctcttcttcctg
gtgatgtgctccttctccctgctcttcctcgactggtacgacagctag
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