Globicephala melas (long-finned pilot whale): 115857430
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Entry
115857430 CDS
T11080
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X2
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115857430 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115857430 (CLP1)
Enzymes [BR:
gmf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
115857430 (CLP1)
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
115857430 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_18
ATP_bind_1
TniB
MMR_HSR1
AAA_22
AAA_16
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
115857430
NCBI-ProteinID:
XP_030720227
LinkDB
All DBs
Position
8:complement(11733427..11741541)
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AA seq
444 aa
AA seq
DB search
MVIGGKKKYEARHSSHTKKMGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLAGM
AEIFGTELTRNKKFTFDAGAKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLYLNTHTALE
QMRRQAEKEEERGPRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPG
TMGALYIERPADVEEGFSIQAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRA
SVSGCVINTCGWVKGSGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPK
SGGVVERSKDFRRECRDERIREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPL
GMSQEDNQLKLVPVSPGRDMVHHLLSVSSAEGTEENLSETSVAGFIVVTSVDLEHQVFTV
LSPAPRPLPKNFLLIMDIRFMDLK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcggaggtaagaagaagtatgaagcaaggcacagcagccacacaaaaaagatg
ggagaggaggccaatgatgacaagaagccaaccactaaatttgaactagagcgagaaaca
gaacttcgctttgaggtggaggcatctcagtcagttcagttggagctgctcgctggcatg
gcagaaatctttggcacagagctgacccgaaacaagaaattcacctttgatgctggtgcc
aaggtggctgttttcacttggcatggctgttctctacagctcagtggccgcaccgaggtg
gcttatgtctccaaggacacccctatgttgctttatctcaacactcatacagccttggag
cagatgcggaggcaggcggagaaggaagaagagcgagggccccgggtgatggtagtgggc
cccactgatgtgggcaagtccacagtgtgccgtctgctgctcaactacgcagtgcgtttg
ggccgccggcccacttacgtggagttggatgtgggccagggctctgtgtccatccctggt
accatgggggccctctacattgagcggccagcagatgttgaagagggattctctatccag
gcccctctggtgtatcattttggctccaccactcctggcaccaacatcaagctttataat
aagattacatctcgtttagcagatgtgttcaaccaaaggtgtgaagtgaaccgaagggcc
tctgtgagtggctgtgtcattaacacctgtggctgggtcaagggctctggttaccaggca
ctggtgcatgcagcctctgcctttgaggtggacgtagttgtggttctggatcaagaacga
ctgtacaatgaactgaaacgggacctacctcactttgtacgcaccgtgctgctccctaaa
tccgggggcgtggttgagcgctccaaggacttccggcgggaatgtagggatgagcgtatc
cgtgagtatttctatggattccggggttgtttctatccccacgccttcaatgtcaaattt
tcagatgtgaaaatctacaaagttggggcacccaccatcccagactcctgtctgcctctg
ggcatgtctcaggaggacaatcagctcaagctagtgcccgtcagccctggccgagacatg
gtgcaccacctcctgagtgtcagctctgctgagggcacagaggagaacctttcagagacc
agtgtggccggcttcatcgtggtgaccagtgtggacctagagcatcaggtgtttactgtt
ctctctccagccccccgcccactgcctaagaacttccttctcattatggatatccggttc
atggatcttaagtag
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integrated database retrieval system
