Globicephala melas (long-finned pilot whale): 115857447
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Entry
115857447 CDS
T11080
Symbol
NUP160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03013
Nucleocytoplasmic transport
gmf05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115857447 (NUP160)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
115857447 (NUP160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115857447 (NUP160)
03036 Chromosome and associated proteins [BR:
gmf03036
]
115857447 (NUP160)
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115857447 (NUP160)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115857447 (NUP160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Nup160_C
Beta-prop_Nup120_160
TPR_NUP160_120_M
NUP160_helical
HEAT_Nup120
TTC22_C
Motif
Other DBs
NCBI-GeneID:
115857447
NCBI-ProteinID:
XP_030720263
LinkDB
All DBs
Position
8:12566713..12620587
Genome browser
AA seq
1402 aa
AA seq
DB search
MATAGAMERSFVELSGAERERPRHFREFTVCCIGTANVVAGAVKYGESAGGFCYVESGKL
FSVTRNRFIHWKTSGDTLELVEESLDINLLNNAVRLKFQNCILLPGGVHVSETPNHVIIL
ILTNQTVHRLLLPHPSRMYRSELVIESQMQSIFTDIGKVDFRDPCNYQLIPTVPGLSPHS
TTSAAWLSNDGEALFAVPSASGGIFVLKLPPHDVPGMVSVVELKQSSVMQRLLIGWMPTV
IRGDQGPSDRPLSLAVHCVKNDAFIFALCQDHKLRMWSYKEQMCLMVADMLEYVPVNKDL
RLTAGTGHKLRFAYSSTLGVCLGIYMHAPKRGQFCIFQLVSVENNRYSIDHISSLFTSQE
TLIDFALTSTDIWVLWHDAENQTVVKYINFEHNVTGQWNPVFMQPLPEEEIIIRDDQDPR
EMYLQSLFTPGRFINAALCKALQIFCRGTDRNLDLSWNELKKEVTLAVESELQGSVTEYE
FSQEEFRNLQQEFWCKFYACCLQYQEALSHPLALHVNPHTNMVCLLKKGYLSFLVPSSFV
DHLYLLPDENLLTEDETIISDDVDVARDVVCLIKCLRLIGESVTTDMSVMMEMSCYNLQS
PEKAAEQILEDLIAIDVDSVMEDICSKLQEIRNPIHAIGLLIREMDYETEVEMEKGFDPA
QPLNIRMNLSQVYGSSTAGRIVCRSVCKIASTRFLICRDLLILQQLLMRLGDAVILGAGQ
LFQAQQELLHRTAPLLLSYYLIKWGSQCLATDVPVDTLESNLQHLSVLELTDSGALMANK
FVSSPQTIVELFFQEVARKHIISHLFSQPKAPLSQTELNWPEMITAITSYLLQLLWPSNP
GCLFLECLMGNCQYVQLQDYIQLLHPWCQVNVGSCRFMLGRCYLVTGEGQKALECFCQAA
SEVGKEEFLDRLIRSEDGEIVSTPRMQYYDKVLRLLDVVGLPELVIQLATSAITEAGDDW
KSQATLRTCIFKHHLDLGHNSHAYEALTQIPDSSRQLDCLRQLVVVLCERSQLQDLVEFP
YVNLHNEVVGIIESRARAVDLMTYNYYELLYAFHIYRHNYRKAGTVMFEYGMRLGREVRT
LRGLEKQGNCYLAAINCLRLIRPEYAWIVQPASGAVYDRPGASPKRNHDGECTAAPTNRQ
IEILELEDLEKECSLARIRLTLAQHDPSAVTVAGSSSAEEMVTLLVQAGLFDTAIALCQT
FKLPLMPVFEGLAFKCIKLQFGGEAAQAEAWAWLAANQLSSVITTKESSATDEAWRLLST
YLEKYKVQNNLYHHCVINKLLSHGVPLPNWLINSYKKVDAAELLRLYLNYDLLEEAVDLV
SEYVDAVLGKGHQYFGIEFPLSATAPMVWLPYSSIDQLLQALGENSANSHNIALSQKILD
KLEDYQQKVDKATRDLLYRRNL
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcgggagccatggaacggagcttcgtggagctcagcggagctgagcgcgaa
aggccgaggcactttcgggagttcacagtctgctgcattggaactgcaaatgtcgtggcc
ggagccgtgaaatacggtgagagcgcgggaggcttctgttatgtggaaagtggcaagttg
ttctccgtcaccagaaacaggttcattcattggaagacctctggagatacattggagctg
gtggaagagtcactggacataaatctgttaaataatgcagttcgcctcaaattccaaaat
tgcatcctcttacccggaggggttcatgtctctgagactccgaatcatgtgataatcttg
atattaaccaatcaaacagtgcacaggttacttttaccacacccttcccggatgtatagg
agtgagttggtaattgaaagtcagatgcagtcaatattcactgacattggaaaagttgac
ttcagggatccttgcaactatcagttaattccaacagtacctggactctcccctcattct
accacctcggcagcctggcttagcaatgacggggaggctctgtttgctgtaccatctgcc
tctgggggaatctttgttcttaaactacctcctcatgacgtacctgggatggtgtcagtt
gtggagctgaaacagagttcagtaatgcaacgattgcttataggctggatgccaacagtt
atcagaggtgatcaggggccttcagatcgtcccctgagtcttgctgttcattgtgtcaag
aacgatgccttcatctttgctctatgtcaggatcataaactacgaatgtggtcttataag
gagcaaatgtgcctgatggtagctgacatgctagagtatgtccctgtgaataaagatctt
cggctcactgctgggactggacacaaattacgatttgcctattcctctaccctgggagtc
tgcctagggatatacatgcatgcaccaaagcgaggacagttctgcattttccagttggta
agcgttgagaataaccgctacagcatagatcacatttcctcactattcacttctcaggag
acactgattgactttgccttaacctctacggatatctgggtcttgtggcatgatgctgag
aaccaaacagttgtgaaatatatcaactttgaacataatgttacaggtcagtggaatcca
gtttttatgcaacctctgccagaggaagaaatcattatcagagatgatcaagaccccaga
gagatgtatttgcagagtctttttacaccagggcgattcattaatgcagctttatgtaaa
gctttacagattttctgtcgaggaactgacaggaatttagatctctcctggaatgaacta
aagaaagaagttactttagctgttgaaagtgagctccaaggaagtgtaacagagtatgaa
ttttcccaggaagagttccgaaatttacaacaggaattttggtgcaagttctatgcctgc
tgtcttcagtatcaagaagccctttctcatcctcttgccctacatgtgaatccacacaca
aacatggtgtgcctgctgaaaaaagggtacctatctttccttgtgccttcctcctttgtg
gatcatttatatctcctacctgatgagaatcttttgacagaggatgagacaatcatatct
gatgatgtggatgttgctcgggatgtcgtatgtctcataaaatgccttcggctgattgga
gagtcagtaactacggatatgtcagtaatgatggaaatgagttgttacaacctacagtct
ccagaaaaggctgcagaacagattctggaagatttgatcgctattgatgtagacagtgtg
atggaggatatttgtagtaaactgcaagagattaggaacccaatccatgccattggactt
cttatacgggaaatggattatgaaacagaagtggaaatggaaaagggattcgatccagct
cagcctttgaatattcgaatgaatctttcccaggtctatggtagtagcacagcagggcgt
attgtgtgcagaagtgtgtgtaaaattgccagtactcgcttcctcatctgccgagacctc
ttgatcttacagcagctactaatgaggctaggagatgcagtgattttgggagctggtcag
ctctttcaggctcagcaagaactactacatcgaacagctcccctcctcttatcttattac
ctcattaaatggggaagtcagtgcttggctactgatgttccagttgacacactggagtct
aatcttcaacatttatcagtactggaactaactgactctggtgctttaatggcaaataag
ttcgtatctagccctcagacaattgtggagttattcttccaagaagttgcaagaaaacac
attatatctcatttgttctctcaaccgaaggcacctctaagccagactgagttgaactgg
cctgagatgattactgcaattaccagttatttattgcagcttttatggcctagcaatcct
ggttgcctctttctagaatgtttgatgggaaattgtcagtatgtacaattgcaggattat
attcaactgctacatccctggtgtcaagtcaatgttggttcctgtcgatttatgctggga
cggtgttacctggttacaggagagggacagaaggctctggaatgtttctgccaggcagca
tctgaagtgggcaaagaggaattcttagatcgcttgatccgttcagaggatggggagatt
gtgtccacccccagaatgcagtattatgataaggttttgcgtctgctcgatgtcgttggg
ttgcctgaactggttattcagttggctacatcagcaataactgaagcaggtgatgactgg
aaaagtcaggctactttaaggacatgcattttcaaacatcatttggatttaggtcacaat
agccatgcatatgaagccttaacccaaattcctgattccagcagacagttagattgttta
cggcagctggtggtagttctttgtgaacgctcacagctacaggatcttgtagagtttccc
tatgtgaatctgcataatgaggttgtgggaataattgaatcacgtgcgagagctgtggac
cttatgacttacaattactatgagcttctgtatgccttccacatctatcgtcacaattac
cggaaggctggcacagtgatgtttgagtacggaatgcgtcttggcagagaggttcgaact
ctccggggacttgagaagcaaggcaactgttatctggctgctattaattgtttacgcctt
attcgcccagaatacgcatggattgttcagccagcatctggtgcagtgtatgatcgccct
ggagcatcccctaagaggaatcatgatggagaatgcacagctgccccaacaaatagacaa
attgaaatcctggaactagaagatctggagaaagagtgttccttggctcgcattcgcctc
actctagctcagcacgatccctcagcagtcacggttgcaggaagttcgtcagcagaggag
atggtcactctcttggttcaggctggcctctttgacactgccatagcactctgccagact
tttaagcttcccttaatgccagtctttgagggacttgctttcaaatgcatcaaattgcag
tttggaggagaggcagcccaagcagaagcctgggcctggctagcagccaatcagctctca
tcagtcatcaccactaaggagtctagtgctacagatgaagcatggaggctattatcaact
tacctggaaaagtacaaagtccagaataacttatatcaccactgtgtaatcaacaagctc
ttgtctcatggagtgcctctgcctaactggcttataaacagttataagaaggttgatgct
gctgagttgctccgtctctacttaaactatgaccttttagaagaagctgtggatttggtt
tcagaatatgtggatgctgtattgggaaaaggacatcagtactttggaattgagtttcca
ctgtctgcaacagctccaatggtgtggctcccatactcttccattgatcagcttctgcag
gctctgggagagaacagtgccaacagtcacaacattgcactgtcccagaaaatccttgac
aaattggaggactaccagcaaaaagttgataaggcaacacgggatttattatatcgtcgg
aacttgtga
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integrated database retrieval system
