Globicephala melas (long-finned pilot whale): 115857484
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Entry
115857484 CDS
T11080
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X4
KO
K08331
autophagy-related protein 13
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04136
Autophagy - other
gmf04140
Autophagy - animal
gmf04211
Longevity regulating pathway
gmf05010
Alzheimer disease
gmf05014
Amyotrophic lateral sclerosis
gmf05016
Huntington disease
gmf05017
Spinocerebellar ataxia
gmf05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115857484 (ATG13)
04136 Autophagy - other
115857484 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
115857484 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
115857484 (ATG13)
05014 Amyotrophic lateral sclerosis
115857484 (ATG13)
05016 Huntington disease
115857484 (ATG13)
05017 Spinocerebellar ataxia
115857484 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
115857484 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115857484 (ATG13)
03029 Mitochondrial biogenesis [BR:
gmf03029
]
115857484 (ATG13)
Membrane trafficking [BR:
gmf04131
]
Autophagy
Autophagosome formation proteins
ULK complex
115857484 (ATG13)
Atg1 complex
115857484 (ATG13)
Mitochondrial biogenesis [BR:
gmf03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
115857484 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
115857484
NCBI-ProteinID:
XP_030720394
LinkDB
All DBs
Position
8:complement(13514606..13561274)
Genome browser
AA seq
518 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYAVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRHFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
TYPSVEDSQEVCTTSFSTSPPSQLSSSRLSCQPAALGVGSADLGCPAVFAAGLNTTHPYQ
LMVPGKEGGVPLAPNQPAHGAQAGDQERLTTYTPSDGAHCAATPSSSEDTETVSNSSEGR
ASPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAAKNLELEDVDPMVNPPDSPET
TSPLQGSLHSDGSSGGSSGNTQDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSL
SIDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcccaggacagaaaggacctggacaagttcattaagtttttt
gccctcaagactgtccaagtgattgtccaggctcgactgggcgagaagatttgtactcgt
tcatcttcttccccaacgggttcagactggttcaatttagcaatcaaagacatcccagag
gttacgcatgaagcaaagaaggcgctggcagggcagctgcctgccgtcgggaggtctatg
tgtgtggagatctcactcaagacttctgagggagattccatggagctagaaatctggtgt
ctggaaatgaatgaaaagtgtgataaagaaatcaaagtttcctatgccgtgtacaacaga
ctgtcgttgctactgaagtctctccttgctataactagggtgacaccagcttacagactg
tccaggaaacaagggcatgaatatgtcatattgtatagaatatattttggggaagttcag
ctgaatggcttaggagaaggtttccagacagttcgtgttgggacagtgggtacccctgtg
ggcaccatcactctttcttgtgcttacagaattaacttggcattcatgtccaccaggcac
tttgagaggaccccacctatcatggggattattattgatcactttgtggaccgtccctat
cccagctcctcgcccatgcatccctgcaattacagaaccgctggtgaggacactggagta
acatatccttctgtggaagattctcaagaagtgtgtaccacctctttttccacctcccct
ccatcccagctctcaagctctcgcctttcctgtcagcctgctgccctgggcgttggatca
gctgacctgggttgtccagcagtgtttgctgccggcttaaacaccacacacccttaccag
ctaatggttcccgggaaggaaggtggggtaccccttgctcccaaccagcctgcccacggt
gcccaggctggtgaccaggagagactgacaacctacaccccttctgatggggcccactgt
gctgccacaccttccagcagtgaggatactgaaactgtgtcaaacagcagtgagggacgg
gcctccccccatgatgtcttggagaccatctttgtccggaaagtgggggcttttgtcaac
aaacccatcaaccaggtgaccctgaccagtttggacataccctttgccatgtttgctgcc
aagaatttggaactggaagatgtggatcccatggtgaatcctccagattccccagagact
acatctcctcttcagggcagcctgcactctgatggctccagtgggggcagcagtggcaat
acccaggacgactttgtcatgatcgacttcaaaccagctttttctaaagacgacattctt
ccgatggacttggggaccttctatcgtgaatttcagaacccgcctcagctgagcagcctc
tccatagatatcggggcacagtccatggctgaggacttggactcactaccagagaagctg
gctgtgcacgagaagaatgtccgagaatttgatgcctttgtagaaaccctgcagtaa
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