Globicephala melas (long-finned pilot whale): 115857509
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Entry
115857509 CDS
T11080
Symbol
PRDM11
Name
(RefSeq) PR domain-containing protein 11 isoform X1
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmf03000
]
115857509 (PRDM11)
Transcription factors [BR:
gmf03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
115857509 (PRDM11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
SET
Dimer_Tnp_hAT
DUF7822
Zn_ribbon_PRDM4
FOG1-like_PR
EpmC
DUF4954
Motif
Other DBs
NCBI-GeneID:
115857509
NCBI-ProteinID:
XP_030720467
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All DBs
Position
8:complement(14763395..14852688)
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AA seq
1177 aa
AA seq
DB search
MTENMKECLAQTKAAVGEMVTVVKTEVCSPLRDQEYGQPCSRRPDPSAMEVEPRKLKGKR
DLIMPKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIPQGMEVV
KEASGENDVRCINEVIPKGHIFGPYEGQISTQDKSAGFFSWLIVDKNNRYKSIDGSDETK
ANWMRYVVISREERQQNLLAFQHSECIYFRACRDIRPGERLRVWYSEDYMKRLHSMSQET
IHRNLARGEKKLQREKSEQALDNPEDLRGPLQLPVLRQGKSPYKRGFDEGDVHPQAKKKK
IDLIFKDVLEASLESAKVEAHQLALSTSLVIRKVPKYQNDAYSQCAMTVSHGVQNVTRTQ
GEGDWKIPQGVSKEAGPLEDEEEEPSSFKADSPAEASLASDPHELPTTSFCPNCIRLKKK
VRELQAELDMLKSGTLPEPPTLPAQVLELPEFSDPAASESMVSGPAIMEDDDQEVDSADE
SVSNDMMTATDEPSKMSSATGRRIRRFKQEWLKKFWFLRYSPTLNEMWCHVCRQYTVQSS
RTSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLRMHPEKTEEMCRNMTLLFNTAYHLA
LEGRPYLDFRPLAELLRKCELKVVDQYMNEGDCQILIHHIARALREDLVERIRQSPCLSI
ILDGQSDDLLADTVAVYVQYTSSDGPPATEFLSLQELGFSSTESYLQALDRAFSALGIRL
QDEKPTVGLGIDGANVTASLRASMFMTIRKTLPWLLCLPFMVHRPHLEILDAISGKELPC
LEELENNLKQLLSFYRYSPRLLCELRSTASTLCEETEFLGDIRAVRWIIGEQNVLNALIK
DYLEVVAHLKDVSSQTQRADASAIALALLQFLMDYQSIKLVYFLLDVIAVLSRLAYVFQG
EYLLVSQVDDKLEEAIQEISRLADSPGEYLQEFEENFRESFNGISVKNLRVAEAKFQSIR
EKICQKTQVILAQRFDSRSRIFVKACQVFDLAAWPRNSEELMSYGKEDMVQIFDHLEAIP
TFSRDVCREGLDPRGSLLMEWRELKADYYTKNGFKDLIGHICKYKQRFPLLNKIIQVIKV
LPTSTACCEKGRNALQRVRKNHRSRLTLEQLSDLLTIAVNGPPIANFDAKRALDSWFEEK
SGNSYTLSAEVLSRMSALEQKPVLQTVDHGSEFYPDI
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaacatgaaggagtgcttggcgcagaccaaggcagccgtgggggagatggtg
acggtggtgaagacagaggtctgctcaccgctccgcgaccaggagtatggccaaccctgc
tctaggagaccagacccctccgccatggaagtggagcccaggaaactgaaggggaagcgt
gacctcatcatgcccaaaagcttccagcaagtggacttctggttctgcgagtcctgccag
gagtactttgtggatgagtgcccgaaccatggtcccccggtgtttgtgtccgacacgccg
gtgcctgtgggcatcccagaccgggcggccctcaccatcccccagggcatggaggtggtc
aaggaagccagtggggagaatgacgtgcgttgcataaatgaggtcatccccaagggccac
atcttcggcccctatgaggggcagatctccacccaggacaaatcagctggcttcttctcg
tggctgattgtggacaagaacaaccgctacaagtccattgatgggtcagatgagactaaa
gccaactggatgaggtacgtggtcatctcccgggaggagaggcagcagaacctgctggcg
ttccagcacagcgagtgcatctactttcgggcgtgccgggacatccggcccggggagcgg
ctgcgggtctggtacagcgaagactacatgaagcgcctgcacagcatgtcccaagagacc
atccaccgcaacctggccagaggagagaagaagttgcagagggagaagtctgagcaggct
ctggataacccagaagacctgaggggtcccctgcagctccctgtgttgagacagggcaaa
agtccctacaagcgtggctttgatgagggggacgtgcacccccaggccaagaagaagaaa
atcgacctcattttcaaggatgtgttggaggcctcactggaatctgcaaaggtagaagcc
caccagctggcactgagcacctcgctggtcatcaggaaggtccccaagtaccagaacgac
gcctacagtcagtgtgcaatgactgtgtcacatggcgtgcaaaatgtcacccggacccag
ggagaaggagactggaagatcccccaaggggtttccaaggaggcaggcccactggaggat
gaagaggaggagccttcgtcgttcaaggccgacagtcccgccgaggcctcccttgcatcc
gaccctcacgagctgcccaccacctccttttgccctaactgtattcgcctaaagaagaag
gtccgggaactccaggccgaactagacatgcttaagtctggcacgcttcctgagcccccc
accttgccagcacaggtactggagctccccgaattctcagaccccgcagcctcagagagc
atggtctccggccctgccatcatggaggacgacgaccaggaggtcgattcggcagacgaa
tccgtctccaacgatatgatgacggccaccgatgagccctccaagatgtcgtcggccacc
gggcgccgaatccggcgcttcaagcaggagtggctgaagaaattctggttcctgcggtac
tccccgaccctcaacgagatgtggtgtcacgtctgccgccagtacacggtgcagtcctcc
cgcacctcggccttcatcatcggctccaagcagttcaagattcacaccatcaagctgcac
agccagagcaacctgcacaagaagtgtctgcagctctacaagctccgcatgcaccccgag
aagacggaggagatgtgtcgcaacatgaccctgctcttcaacaccgcctaccacctggcc
ctggagggcaggccctacctggacttccggcccctggccgagctgctgcggaagtgcgag
ctcaaggtggtggaccagtacatgaacgagggagactgtcagatcctcatccaccacatc
gcccgggcgctgcgcgaagacctggtggagcgcatccgccagtcaccctgcctcagcatc
atcctggacggacagagcgacgacctgctggctgacacggtggcagtctacgtccaatac
accagcagcgacgggcccccggccacggagttcctgtccctgcaggagctggggttctcc
agcacagagagctatctgcaggcgcttgaccgggccttttccgccttgggcattcggctg
caggatgagaagcccaccgtgggcttgggcatagacggggccaacgtcacggccagcctg
cgggccagcatgttcatgacgatacgcaagacgctgccctggctgctgtgcctgcccttc
atggtgcaccggccccacctggagatcctggatgccatcagtgggaaggagctcccctgc
ctggaggagctggagaacaacctgaagcagctgctgagcttctaccgttactcgccacgc
ctcctgtgcgagctgcggtccacggcgtccaccctctgcgaggagacggagttcctgggg
gacatccgggctgtgaggtggatcatcggagagcagaacgtcctcaatgccctcatcaag
gactacctggaggtggtggcccacctcaaggatgtcagcagccagacccagagggcagac
gcctcggccatcgcactggccctgctgcagttcctcatggactaccagtccatcaagctc
gtctacttcctcctggacgtgatcgccgtgctgtcgcgcctggcctacgtcttccagggc
gagtacctcctggtgtcccaggtggacgacaagctcgaggaggccatccaggagatcagc
cggctggccgactctccgggggagtacctgcaggagttcgaggagaacttccgggagagc
ttcaacgggatctccgtgaagaacctcagggtggccgaagccaagttccagtccatccgg
gagaagatctgccagaagacccaagtgatcctggctcagcggttcgattcccgcagccgg
atcttcgtgaaggcctgccaggtgtttgacctggccgcctggcccaggaacagcgaggag
ctcatgagctacggcaaggaggacatggtgcagatctttgatcacctggaggccatcccc
accttttcccgggatgtctgcagggaagggctggacccccgggggagtctgctgatggag
tggcgggaactcaaggctgattactacaccaaaaacggcttcaaggacctgatcggccac
atctgcaaatacaagcagaggtttccactcttgaacaagatcatccaggtcatcaaagtc
ctccccacctccaccgcttgctgcgagaaaggccgaaacgccctgcagcgagtccgcaaa
aaccaccgctcccgcctgaccctggagcagctcagcgacctgttgaccatcgctgtcaac
ggccccccgatcgccaactttgatgccaagcgagccctggacagctggttcgaggagaag
tctggcaacagttacacactgtcggccgaggtcctcagcaggatgtctgcgctggaacag
aagccagtgcttcagaccgtggaccacgggtcagagttttacccggatatttag
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