Globicephala melas (long-finned pilot whale): 115857549
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Entry
115857549 CDS
T11080
Symbol
CD44
Name
(RefSeq) CD44 antigen isoform X1
KO
K06256
CD44 antigen
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04512
ECM-receptor interaction
gmf04640
Hematopoietic cell lineage
gmf05169
Epstein-Barr virus infection
gmf05205
Proteoglycans in cancer
gmf05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115857549 (CD44)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
115857549 (CD44)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
115857549 (CD44)
05205 Proteoglycans in cancer
115857549 (CD44)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
115857549 (CD44)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmf04147
]
115857549 (CD44)
04090 CD molecules [BR:
gmf04090
]
115857549 (CD44)
00535 Proteoglycans [BR:
gmf00535
]
115857549 (CD44)
00536 Glycosaminoglycan binding proteins [BR:
gmf00536
]
115857549 (CD44)
Exosome [BR:
gmf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115857549 (CD44)
Exosomal proteins of other body fluids (saliva and urine)
115857549 (CD44)
Exosomal proteins of colorectal cancer cells
115857549 (CD44)
Exosomal proteins of bladder cancer cells
115857549 (CD44)
CD molecules [BR:
gmf04090
]
Proteins
115857549 (CD44)
Proteoglycans [BR:
gmf00535
]
Cell surface proteoglycans
Others
115857549 (CD44)
Glycosaminoglycan binding proteins [BR:
gmf00536
]
Hyaluronan
Cell surface receptors
115857549 (CD44)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Motif
Other DBs
NCBI-GeneID:
115857549
NCBI-ProteinID:
XP_030720570
LinkDB
All DBs
Position
8:complement(23272555..23358497)
Genome browser
AA seq
742 aa
AA seq
DB search
MDTFWWRAAWGLCLVQLSLAQIDLNITCRYKGVFHVEKNGRYSISKTEAADLCKAFNCTL
PTMAQMEAALLAGFETCRYGFIDGHVVIPRIHPNSICAANNTGVYILTSNTSQYDTYCFN
ASAPPEEDCTSVTDLPNTFEGPITITIVNRDGTRYTKKGEYRTNPDDINPSTTPEEDMSS
GSSSERSTSGGYNIFHTHLPTVYPTSDQDSPWVPSNPETTPATTVMSTSGTTSKTATKRQ
GAQDWFSWWFQPSASKIHLHTTTVMAGTDSNIISAGWEATEENEDESDRHPSYSGSDIDD
DEDFISSTISTTPRVFNHPQQNQDWTQPSPGHSNPEVSLQTTTRMTDVDRSSTSAYGEKW
TQETHSSLSHHGYHDEEETQHPTSTTRAPPTSTTEETATQKEQWFENGWPGEYPQMPKED
SHSTAGTTAASARDSHQNQRVTVQSQEDRSWTYFFDPVSHPMGRGHQTERRMDVDTSHST
TLQPSADPNTGLVEDLDRTGPLSVTTQQSATQSFSTSRGGLEEDKDHPVTATPTSSNRND
GTGGRRGENLPEDSTTSVEGYTPYSPDTNEYRTLIPVTPAKTGSPEVTIVGDSTSNVDLS
LSGDRDSSHDPSGTSYTTHGSESAGHSSGSQDRGANTTSGPMRKPQIPEWLIILASLLAL
ALILAVCIAVNSRRRCGQKKKLVINNGNGTMEDRKPSGLNGEASKSQEMVHLVNKESTET
PDQFMTADERRNLQNVDMKIGV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggacacgttctggtggcgcgcagcttggggactctgcctcgtgcaactgagtttggcg
cagatcgacctaaatataacctgccgatacaaaggtgtattccacgtggagaagaatggt
cgctacagcatctcgaagactgaggctgctgacctctgcaaggccttcaattgtacgctg
cccaccatggcccagatggaggcagccctgctcgcagggtttgagacctgcaggtacggg
ttcatagatgggcacgtggtgatcccccggatccaccccaattccatctgtgctgcaaac
aacacgggagtgtacatcctcacatccaatacctcccagtatgacacgtattgcttcaat
gcttcagctccacctgaagaagactgcacatcagtcacagacctgcccaatacctttgaa
ggaccaattaccataactattgttaaccgtgacggcacccggtacaccaagaaaggggaa
tacagaactaaccccgatgacatcaaccccagcaccactcccgaggaggacatgagcagt
ggatcctccagtgagagaagcacttcagggggctacaacatcttccacacccatcttcca
accgtgtacccgacctcggaccaagatagtccctgggtccccagcaacccagagactacc
ccagctaccactgtgatgagcactagtggtacaacttccaaaacagcaaccaagaggcaa
ggagcccaggattggttttcttggtggtttcagccatcagcatccaagattcatcttcat
accacaacagtaatggctggtacggattcaaatatcatctcagcaggctgggaggcaact
gaagaaaatgaagatgaaagtgacagacaccccagttattctggatcagacattgatgat
gatgaagattttatctccagcaccatttcaaccacgccacgggtttttaaccacccacaa
cagaaccaggattggacgcaaccgagcccaggccattcgaatccagaagtatcacttcag
acaaccacaaggatgactgatgtggacagaagtagcaccagtgcttacggagaaaaatgg
acccaggaaacacactcttctctcagtcaccatggatatcatgatgaagaggagacccag
catcctacaagcacaacccgggcaccccctactagtacaacggaagaaacagctacccag
aaagagcagtggtttgagaatggatggcctggggaatatccccaaatgccaaaagaagac
tctcattcaacagcagggacaactgcagcctcagcccgtgacagccatcaaaatcaaaga
gtgacagtgcagagccaagaggaccgttcctggacttatttcttcgacccagtctcacat
ccaatgggacgaggtcatcaaacagaaagaaggatggatgtggacaccagccatagtacg
acgcttcagccttctgcagatccaaacacaggtttggtggaagacttggacaggacagga
cctctttcagtgacaactcagcagagtgctactcagagcttctctacatcgcgtggaggc
ttggaagaagacaaagaccatcccgtgactgctactccaacatctagcaataggaatgat
ggcacaggtggcagaagaggtgaaaatcttcctgaagactcaactacttcagtggaaggt
tatactccttattctccagacacaaatgaatacagaaccctcatcccagtgacccctgct
aagactgggtcccctgaagttactattgttggagattctacttctaatgttgatctttct
ttatcaggagaccgagactcatcccatgaccccagcgggacgtcctatacgactcatgga
tccgaatcagctgggcactcaagtgggagtcaggaccgtggggcaaacacaacctcaggt
cctatgcggaaacctcaaattccagaatggctgatcatcttggcatctctcctggccctg
gctttgattcttgcagtttgcatcgctgtcaacagtaggagaaggtgtgggcagaagaaa
aagctggtgatcaacaatggcaatggcactatggaggacagaaagcccagcggactcaac
ggagaagctagcaagtctcaggagatggtgcatttggtgaacaaggagtcgacagagacc
ccagaccagtttatgaccgcagatgagaggcggaacctgcagaatgtggacatgaagatt
ggggtgtaa
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