Globicephala melas (long-finned pilot whale): 115857814
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Entry
115857814 CDS
T11080
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115857814 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gmf04990
]
115857814 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
gmf04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
115857814 (PDLIM1)
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Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
DUF3322
Motif
Other DBs
NCBI-GeneID:
115857814
NCBI-ProteinID:
XP_030721006
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All DBs
Position
16:31955267..32001111
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AA seq
329 aa
AA seq
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MTTQQIALQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAATANLCVGDVITAIDGENTSN
MTHLEAQNKIKGCTDNMTLTVTRSEQKIWSPLVTEEGKRHPYKMNLASEPQEVLHIGSAH
NRSAMPFTASPASSPAPRVITNQYNNPAGLYSPENISNFNNALESKTAASGQEMNGRALD
HSQLPSGLVIDKESEVYKMLQEKQELNEPPKQSTSFLVLQEILESEEKGDPNKPSGFRSV
KAPVTKVAASIGNAQKLPICDKCGTGIVGVFVKLRDRHRHPECYVCTDCGTNLKQKGHFF
VEDQIYCEKHARERVTPPEGYDVITVFPK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcagcaaatagcgctccagggcccgggaccgtggggcttccgcctcgtgggg
ggcaaggacttcgagcagcctctcgccatttcccgggtcactcccggaagcaaggctgct
acagctaatttatgtgttggagatgtaatcacagccatcgatggggaaaataccagcaat
atgacacacttggaagctcagaacaaaatcaagggctgcacagacaacatgactctcaca
gtaaccagatctgaacagaaaatctggtctcctctggtgacagaggaagggaaacgtcac
ccatacaagatgaatttagcctctgaaccccaagaggtcctacacataggaagcgcccac
aaccggagtgccatgccctttaccgcctcacctgcctccagccctgcccccagggtcatc
acaaaccagtacaacaacccagctggcctctactcccctgaaaacatctccaacttcaac
aacgccttggagtcaaagacggcagccagcgggcaggagatgaatggcagagccttagac
cattctcagcttccaagcggactcgtcattgacaaagaatctgaagtttacaagatgctt
caggagaaacaagagttaaatgagcctccaaaacagtccacttcattcctggttttgcag
gaaatcctggagtctgaggagaaaggggatcccaacaagccctcaggattcagaagtgtt
aaggctccagtcaccaaagtggctgcatcgattggaaacgcccagaagctgcccatatgt
gacaagtgtggcaccggcattgtcggcgtgtttgtgaagctgcgggaccgtcaccgccac
cctgagtgttacgtgtgcaccgactgtggcacgaacctgaaacagaagggccatttcttt
gtggaggatcagatctactgtgaaaagcacgcccgggagcgggtcactccacccgagggc
tacgatgtgatcactgtgttccccaagtga
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