KEGG   Globicephala melas (long-finned pilot whale): 115857915
Entry
115857915         CDS       T11080                                 
Symbol
BTRC
Name
(RefSeq) F-box/WD repeat-containing protein 1A isoform X1
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf04114  Oocyte meiosis
gmf04120  Ubiquitin mediated proteolysis
gmf04218  Cellular senescence
gmf04310  Wnt signaling pathway
gmf04340  Hedgehog signaling pathway
gmf04390  Hippo signaling pathway
gmf04710  Circadian rhythm
gmf05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    115857915 (BTRC)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    115857915 (BTRC)
   04340 Hedgehog signaling pathway
    115857915 (BTRC)
   04390 Hippo signaling pathway
    115857915 (BTRC)
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    115857915 (BTRC)
   04218 Cellular senescence
    115857915 (BTRC)
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    115857915 (BTRC)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    115857915 (BTRC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gmf04121]
    115857915 (BTRC)
   03036 Chromosome and associated proteins [BR:gmf03036]
    115857915 (BTRC)
Ubiquitin system [BR:gmf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     115857915 (BTRC)
Chromosome and associated proteins [BR:gmf03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     115857915 (BTRC)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_TEP1_C Beta-prop_TEP1_2nd DSE1_N EIF3I WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-TrCP_D WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR41 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd F-box-like Beta-prop_EIPR1 CFAP251_N Beta-prop_RIG_2nd WDR90_beta-prop_4th ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_Aladin PAC11 ASA1 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IP5PC_F Beta-prop_DCAF4 TRM82_WD F-box Beta-prop_DCAF12 Beta-prop_VPS8 Beta-prop_IFT140_1st WD40_like Beta-prop_NOL10_N WD40_RFWD3 Beta-prop_HPS5 Beta-prop_WDR11_2nd Beta-prop_WDR19_1st Beta-prop_Nup120_160 F-box_5 WD40_2 Aq_678 DUF4508 DUF6188 MTUS1_CCDC69_CC1
Other DBs
NCBI-GeneID: 115857915
NCBI-ProteinID: XP_030721239
LinkDB
Position
16:complement(26638815..26826615)
AA seq 634 aa
MDPAEAVLQEKALKFMCSMPRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQIHLYTFIV
IMALKTFALGINKRSHNSVSVNSSEREDCNNGEPPRKIIPEKNSLRQTYNSCARLCLNQE
TVCLASTAMKTENCVAKTKLANGTSSMIVPKQRKLSASYEKEKELCVKYFEQWSESDQVE
FVEHLISQMCHYQHGHINSYLKPMLQRDFITALPARGLDHIAENILSYLDAKSLCAAELV
CKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKPPDGNAPPNSFYRAL
YPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKS
TLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF
NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW
NTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC
IRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSS
SHDDTILIWDFLNDPAAQAEPPRSPSRTYTYISR
NT seq 1905 nt   +upstreamnt  +downstreamnt
atggacccggccgaggcggtgctgcaggaaaaagcgctcaagtttatgtgctctatgccc
aggtctctgtggctgggctgctccagcctggcggacagcatgccttcgctgcgatgcctg
tataacccagggactggcgcactcacagctttccagatacacctctatacattcattgtt
ataatggctttgaagacgtttgcccttggaattaataaaaggagtcacaactctgtatct
gtgaattcctcagagagagaagactgtaataatggcgaaccccctaggaagataatacca
gagaagaattcacttagacagacctacaacagctgtgccagactctgcttaaatcaagag
acagtatgtctagcaagcactgctatgaagactgaaaattgtgtggccaaaacaaaactt
gccaatggcacttccagtatgattgtgcccaagcaacggaagctctcggcaagctatgag
aaggaaaaggaactgtgtgtcaaatattttgagcagtggtcagagtccgatcaagtggaa
tttgtggaacatcttatatcccaaatgtgtcattaccaacatgggcacataaactcgtat
cttaaacctatgttgcagagggatttcataactgctctgccagctcggggtttagatcac
atcgctgagaacattctgtcatacctggatgccaaatcactgtgtgctgctgaacttgtg
tgcaaggaatggtaccgagtgacatctgatggcatgttatggaagaagctcatcgagaga
atggtcaggacagattctctgtggagaggcctggcagaacgaagagggtggggacagtat
ttattcaaaaacaaacctcctgatgggaatgctcctcccaactctttttatagagcactt
tatcctaaaatcatacaagatattgagacaatagaatctaattggagatgtggaagacat
agcttacagagaatccactgccgaagtgaaacaagcaaaggagtttattgtttacagtat
gatgatcagaagatagtaagcggccttcgagataacacaatcaagatctgggataaaagc
acattggaatgcaagcgaattctcacaggccacacaggttctgtcctgtgtctccagtat
gacgagagggtgatcataactggatcatcggattccacagtcagggtgtgggatgtaaat
acaggtgaaatgctaaacacattgattcaccattgtgaagcagttctgcacttgcgtttc
aataatggcatgatggtgacctgttccaaagaccgttccattgcggtgtgggatatggcc
tccccaactgacatcaccctcaggagggtgcttgttggacaccgagctgcagtcaatgtc
gtggactttgatgacaagtacatcgtttctgcatctggggataggactataaaggtatgg
aacacaagtacttgtgaatttgtaaggaccttaaatggacacaaacgcggaattgcctgt
ttgcagtacagagacaggctggtcgtgagtggctcatctgacaacactatcagattatgg
gacatagaatgtggtgcatgcttacgagtgttagaaggccatgaggaattggtgcgctgt
attcgattcgataacaagaggatagtcagtggagcctatgatggaaaaattaaggtgtgg
gatcttgtagctgctttggacccccgtgctcctgcaggaactctctgtctacggaccctt
gtggagcattctggaagagttttccgactccagtttgatgaattccagattgtcagtagt
tcacatgatgacacaatcctcatctgggacttcctaaatgatccagctgcccaagctgaa
cccccccgctccccttctcgaacatacacttatatctccagataa

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