Globicephala melas (long-finned pilot whale): 115857948
Help
Entry
115857948 CDS
T11080
Symbol
TRIM8
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM8
KO
K12001
tripartite motif-containing protein 8 [EC:
2.3.2.27
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmf04121
]
115857948 (TRIM8)
Enzymes [BR:
gmf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115857948 (TRIM8)
Ubiquitin system [BR:
gmf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115857948 (TRIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRIM_CC
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-B_box
zf-RING_10
zf-RING_5
CASP_C
zf-Nse
dCache_2
FliD_C
Motif
Other DBs
NCBI-GeneID:
115857948
NCBI-ProteinID:
XP_030721338
LinkDB
All DBs
Position
16:complement(25713280..25728219)
Genome browser
AA seq
551 aa
AA seq
DB search
MAENWKNCFEEELICPICLHVFVEPVQLPCKHNFCRGCIGEAWAKDSGLVRCPECNQAYN
QKPGLEKNLKLTNIVEKFNALHVEKPPAALHCVFCRRGPPLPAQKVCLRCEAPCCQSHVQ
THLQQPSTARGHLLVEADDVRAWSCPQHNAYRLYHCEAEQVAVCQYCCYYSGAHQGHSVC
DVEIRRNEIRKMLMKQQDRLEEREQDIEDQLYKLESDKRLVEEKVSQLKEEVRLQYEKLH
QLLDEDLRQTVEVLDKAQAKFCSENAAQALHLGERMQEAKKLLGSLQLLFDKTEDVSFMK
NTKSVKILMDRTQTCTGSSLSPPKIGHLNSKLFLNEVAKKEKQLRKMLEGPFSTPVPFLQ
SVPLYPCGVSSSGAEKRKHSTAFPEASFLETSSGPVGSQYGAASTASGEGQSGQPLGPCS
STQHLVALPGGAQPVHSSPVFPPSQYPNGSAAQQPMLPQYGGRKILVCSVDNCYCSSVAN
HGGHQPYPRSGHFPWTVPSQEYSHALPPTPSVPQSLPSLAVRDWLDASQQPGHQDFYRVY
GQPSTKHYVTS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaattggaagaactgcttcgaggaggagctcatctgccccatctgcctgcat
gtcttcgtggagccggtgcaattgccgtgcaaacacaacttctgtcggggctgcattggc
gaggcgtgggccaaggacagcggcctggtgcgctgcccagagtgcaaccaggcctacaac
cagaagccgggcctggagaagaacctgaagctcaccaacatcgtggagaagttcaatgcc
ctgcacgtggagaagccgccggcggcgctgcactgcgtgttctgccgccgtggccccccg
ctgccggcgcagaaggtctgcctgcgctgcgaggcgccctgctgccagtcccacgtgcag
acgcacctgcagcagccctccaccgcccgcgggcacctcctggtggaggcggacgatgtg
cgggcctggagctgcccgcaacacaacgcctaccgcctttaccactgcgaggccgagcag
gtggccgtgtgccagtactgctgctactacagcggtgcgcatcagggacactcggtgtgc
gacgtggagatccggaggaatgagatccggaagatgctgatgaagcagcaggaccggctg
gaggagcgagagcaggacattgaggaccagctgtacaaactcgagtcagacaagcgcctg
gtggaggagaaggtgagccaactgaaggaggaagtgcggctgcaatacgagaagctgcac
cagctgctggatgaggacctgcggcagacggtggaggtcctggacaaggcccaggccaag
ttctgcagcgagaacgcagcgcaggcgctgcatctcggggagcgcatgcaggaggccaag
aagctgctgggctccctgcagctgctcttcgacaagacggaggacgtcagcttcatgaag
aacaccaagtctgtgaaaatcctaatggacaggacccagacctgtacaggcagcagcctt
tctccccctaagatcggccacttgaactccaagctcttcctgaacgaggtggccaagaag
gagaagcagctacggaagatgctagaaggccccttcagcacaccggtgcccttcctgcag
agcgtccccctgtacccttgtggtgtgagcagctctggggcggaaaagcgcaagcactcg
acggccttccctgaggccagtttcctagagacgtcgtcgggccccgtgggcagccagtat
ggggcagcgagcacagccagcggcgagggccagtcagggcagcccctgggcccctgcagc
tccacgcagcacttggtggccctgccgggcggcgcccaaccagtgcactcaagtcctgtg
ttccccccatcgcagtatcccaatggctcggccgcccagcagcccatgctcccccagtat
gggggccgcaagattctcgtctgttctgtggacaactgttactgttcttccgtggccaac
catggcggccaccagccctacccccgctccggccacttcccctggacagtgccctcacag
gagtactcacatgcgctcccgcccacaccttccgtcccccagtcccttcccagcctggcg
gtcagagactggctcgacgcctcccagcagcctggccaccaggatttctacagggtgtat
gggcagccgtccaccaaacactacgtgacgagctaa
DBGET
integrated database retrieval system
