Globicephala melas (long-finned pilot whale): 115857965
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Entry
115857965 CDS
T11080
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115857965 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmf03021
]
115857965 (TAF5)
03036 Chromosome and associated proteins [BR:
gmf03036
]
115857965 (TAF5)
Transcription machinery [BR:
gmf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115857965 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
115857965 (TAF5)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
115857965 (TAF5)
STAGA complex
115857965 (TAF5)
TFTC complex
115857965 (TAF5)
SAGA complex
115857965 (TAF5)
SLIK complex
115857965 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
Cytochrom_D1
eIF2A
ABM-like
PROPPIN
Late_protein_L2
Motif
Other DBs
NCBI-GeneID:
115857965
NCBI-ProteinID:
XP_030721371
LinkDB
All DBs
Position
16:complement(25121901..25136044)
Genome browser
AA seq
800 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLLPPQTGDSAGEGGGGTTNNGPNGGGGNVAASSSAGGD
GGTPKPSVAVSAVAPAGAAPVPAAAPEAGAPHDRQTLLAVLQFLRQSNLREAEEALRREA
RLLEEAVAGSGAPGEADGAGAETASALLSRVTASAPGPAAPDPPVSGASGSAAVSGLATG
PAAPGKVGSVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLF
YPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDF
RTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLA
GEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPN
APPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTD
DSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILY
GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF
VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN
CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHSDTVCSLRFS
RDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPV
VHLHFTRRNLVLAAGAYSPQ
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagttagagcctgagggaccg
ccgacgctgctacctccgcagacgggggacagcgctggcgagggtggcggcggcacaacc
aacaacggccccaacggcggcggtgggaacgttgcggcgtcgtcgtcggccggcggggat
ggtgggacccccaaaccctcggtggctgtctccgccgttgccccggcgggggcggccccg
gtgcccgccgctgctccggaggccggcgctccccacgaccgacagactctgctggccgtg
ctgcagtttctacggcagagcaacctccgcgaggccgaagaggcgctgcgccgtgaggcc
cggctgctggaggaggcagtggcgggctccggagccccgggagaggcggacggcgccggc
gctgagacggctagcgcgcttcttagtcgggtcaccgcgtcggcccccggccctgcggcc
cccgaccctccggtcagcggtgcttcggggtccgccgccgtctcgggcttagcgacaggt
cctgcggctccggggaaagttggaagtgtagctgtggaagaccagccggatgtcagtgcc
gtgctatcagcctacaaccaacaaggagaccccacaatgtatgaagaatactatagtgga
ctgaaacacttcattgaatgttccttggactgccatcgggcagagttatcccaactcttt
tatcccctgtttgtacacatgtatttggaactagtctacaatcaacatgagaatgaagca
aaatcattctttgagaagttccatggagatcaggaatgttattaccaggatgacctacga
gtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttggatttt
cgaacaagtaaatttgttctgcgtatttcccgagactcgtaccaactcttgaagaggcat
cttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacattgac
atctttgatgggatgccgcgtagtaagcaacagatagatgcgatggtgggaagtttggca
ggagaggctaaacgagaggcaaacaaatcaaaggtattttttggtttattaaaagagcca
gaaattgaggtgcctttggatgatgaggatgaagaaggagaaaatgaagaaggaaaacct
aaaaagaagaagcctaaaaaagatagtatcggatccaaaagcaaaaaacaagatcccaat
gctccacctcaaaacagaatccctcttcctgagttgaaagattcagataaattggataag
ataatgaatatgaaagaaaccaccaaacgagtacgccttgggccagattgtttaccctca
atttgtttctatacattcctcaatgcttaccagggcctcactgcagtggatgtcactgat
gattctagtttgattgctggaggttttgcagattcaactgtcagagtgtggtctgtgaca
cccaaaaagcttcgtagtgtcaaacaagcagcagatcttagcctcatagataaagaatct
gatgatgtcttagaaagaatcatggatgagaaaacagcaagtgagttgaagattttgtat
ggtcacagtgggcccgtctatggagccagcttcagtccagataggaactacctgctttcc
tcttcagaagatggaactgttagattgtggagtcttcaaacatttacctgcttggtggga
tataaaggacacaactatccagtgtgggacacacagttttctccatatggatattatttt
gtgtcagggggccacgaccgagtagctcggctctgggctacagatcactatcagccttta
aggatatttgctggccatcttgctgatgtgaattgtaccagattccatcccaattctaat
tatgttgctacgggctctgcagacagaactgtgcggctctgggatgtcctgaatgggaac
tgtgtaaggatcttcactggacacaagggaccaattcattccttgacattttctcccaat
gggagattcctggctacaggagcaacagatggcagagtactcctttgggatattggacat
ggtttgatggttggagaattaaaaggccacagtgatacagtctgttcacttagatttagt
agagatggtgaaattttggcatcaggttcaatggataatacagtacggttatgggatgct
atcaaagcatttgaagatttagagactgatgactttactacagccactgggcatataaat
ttacctgagaattcacaggagttattgttgggaacatatatgaccaaatcaacaccagtt
gtacacctccattttactagaagaaacttggttctagctgcaggagcttatagtccgcaa
taa
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integrated database retrieval system
