Globicephala melas (long-finned pilot whale): 115858002
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Entry
115858002 CDS
T11080
Symbol
PAX2
Name
(RefSeq) paired box protein Pax-2 isoform X1
KO
K15608
paired box protein 2
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmf03000
]
115858002 (PAX2)
04131 Membrane trafficking [BR:
gmf04131
]
115858002 (PAX2)
03036 Chromosome and associated proteins [BR:
gmf03036
]
115858002 (PAX2)
Transcription factors [BR:
gmf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
115858002 (PAX2)
Membrane trafficking [BR:
gmf04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
115858002 (PAX2)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
115858002 (PAX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
Homeodomain
DUF6115
HTH_Tnp_IS1
Ribosomal_S13_N
Motif
Other DBs
NCBI-GeneID:
115858002
NCBI-ProteinID:
XP_030721435
LinkDB
All DBs
Position
16:complement(27274253..27353491)
Genome browser
AA seq
409 aa
AA seq
DB search
MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA
EGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSTSND
PVGSYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEA
LDRVFERPSYPDVFQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQ
TYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTAYNEA
WRFSNPALLMPPPGAPPLPLLPLPMTATSYRGDHIKLQADSFGLHIVPV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggatatgcactgcaaagcagaccccttctccgcgatgcacccagggcacgggggtgtg
aaccagcttgggggggtgtttgtgaatggcaggcccctgcccgacgtggtgaggcagcgc
atcgtggagctggcccaccagggtgtgcggccctgcgacatctcccggcagctgcgggtc
agccacggctgtgtcagcaaaatcctgggcaggtactacgagaccggcagcatcaagccc
ggagtgatcggcggctccaagcccaaagtggcaacacccaaagttgtggacaagattgct
gaatacaagcgacagaacccgactatgttcgcctgggagatccgggaccggctcctggcg
gagggcatctgtgacaatgacacagtgcccagcgtctcttccatcaacaggatcatccgg
accaaagttcagcagcctttccacccaacgccggatggagccgggaccggagtgactgcc
cctgggcacaccatcgttcccagtacggcctcccctcctgtttccagcacctccaatgat
ccggtgggatcctactccatcaatgggatcctggggatccctcgctccaatggtgagaag
aggaaacgtgatgaagatgtgtctgagggctcagtccccaatggagattcccagagtggc
gtggacagtttgcggaagcacttgcgagctgacaccttcacccagcagcagctagaagct
ttggatcgggtctttgagcgtccttcctaccctgacgtcttccaggcatcagagcacatc
aaatcagagcaggggaacgagtactccctcccagcactgacccctgggcttgatgaagtc
aagtcgagtctatctgcatccaccaaccccgagctgggcagcaacgtgtcgggcacgcag
acataccccgttgtgaccggtcgtgacatggcgagcaccactctgcctggttacccccct
cacgtgccccccactggccagggaagctaccccacctccaccctggcaggaatggtgcct
gggagcgagttctccggcaacccgtacagccatccccagtacacggcctacaacgaggct
tggagattcagcaaccccgccttactaatgccgccccccggggctccgcccctgccgctg
ctgccgctgcctatgaccgccactagttaccgcggggaccacatcaagcttcaggccgac
agctttggcctccacatcgtccccgtctga
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