Globicephala melas (long-finned pilot whale): 115858085
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Entry
115858085 CDS
T11080
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
115858085 (SMARCAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmf03036
]
115858085 (SMARCAD1)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115858085 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
CUE
ERCC3_RAD25_C
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
115858085
NCBI-ProteinID:
XP_030721516
LinkDB
All DBs
Position
5:complement(126815859..126886668)
Genome browser
AA seq
1028 aa
AA seq
DB search
MNLFNLDRFRFEKRNKIEEAPEATPQPSLPGPSSPISLSAEEENAEGEVSRAGTPDSDIT
EKTEDSSVPETPENERKASISYFKNQRGIQYIDLSSDSEDVVSPDCSSTVQEKKFSKDTV
IIVSEPSEDEESQGLPTMAGRNNNDISELEDLSELEDLKDAKLQTLKELFPQRSDSDLLK
LIESTSTMDGAIAAALLMFGDAEGGGPRKRKLSSSSEPFEEDEFNDDQSMKKKRLDQGEE
SNESAESSSNWEKQESIVLKLQKEFPNFDKEELREVLKEHEWMYTEALESLKVFAEDQDM
QYASPSEFPNGKEVSSRSQNYPKNAAKTKLKQKCSMKPQNGFNKKRKKTVFNPKRVIEDS
EYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITEL
RPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTG
NGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAY
LYQEGNKGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYN
VIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGT
PVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQTIYEKERIAHAKQIIKPF
ILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNMEKNTEMCNVMMQL
RKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYR
HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL
RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQ
AEDRCHRVGQTKEVLVIKLIGQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSMPADIAT
LLKTSMGL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacctggaccgttttcgctttgagaaaaggaataagattgaggaagcg
cccgaagcaacccctcaaccctccctgcctggcccttcttcaccaatttctcttagtgct
gaagaggagaatgctgaaggggaagttagcagggcaggcacccctgattcagatataact
gaaaaaacagaagattctagtgttccagaaaccccagaaaatgaaagaaaagcaagtata
tcatatttcaagaatcaaagaggaattcaatatattgatttgtcttcagatagtgaagat
gttgtttccccagattgctccagtacagttcaagagaaaaaattcagcaaagacacggtg
attatagtttctgagccatctgaagatgaagagtcccaaggccttcctaccatggcaggt
agaaataataatgatatttcagaattggaagacctttcggaattggaagaccttaaagat
gctaaacttcagaccttgaaggaactttttccacagagaagtgacagtgatttacttaag
ttaattgaatcaaccagcactatggatggagcaattgctgctgccttgctgatgtttggt
gatgcagaaggtggtggacctaggaaaagaaaattatcttcttcttcagagccatttgag
gaagatgaatttaatgatgatcagtctatgaaaaagaagagattggatcaaggagaggag
tcaaatgagtctgcagaatctagcagtaattgggaaaaacaggaaagtattgtgttgaaa
ttgcaaaaggaatttcccaattttgataaagaggaattaagggaagtactcaaggaacat
gaatggatgtacacagaggctttagaatctttaaaagtgtttgcggaagaccaagatatg
caatatgcttcaccaagtgaatttccaaatggaaaagaagtttcttcaaggagtcaaaat
tatcctaaaaacgcagctaaaacaaaactgaaacagaaatgttccatgaaaccacaaaat
ggttttaacaagaaacgtaaaaaaactgtatttaatcctaaaagagttattgaagactct
gaatatgattcaggttctgatgtcggtagttcattagacgaggactatagtagtggtgaa
gaagtgatggaggatggctataaaggtaaaattcttcacttccttcaagatgcttcaatt
ggtgaacttactttgattcctcagtgttctcagaaaaaggctcagaagataacagaactc
cggccctttaatagttgggaagctctgttcacaaagatgtccaaaacgaatggcttatca
gaagatttgatatggcactgtaaaacactgatccaagaaagggatgtagttataaggctt
atgaacaaatgtgaagacatttcaaataaattgacaaaacaagttaccatgctcactgga
aatggaggtggatggaacatagaacaaccctccattctaaaccaaagtttgtcactcaag
ccctatcagaaggttggtttgaattggctggcattggtacataaacatggacttaatggc
attttggcagatgaaatgggcctgggaaaaactattcaagcgattgcattcctagcgtac
ctctatcaggagggtaataaaggtcctcatttgattgttgttccagcatcaactatagat
aactggctaagggaagttaatttatggtgtcccactttaaaggtgctctgttactatggt
tctcaagaagaacgtaaacagattagatataacattcatagtaaatacgaagaatacaat
gtaatcgtgaccacgtataattgtgcaatcagcagttctgatgatcgtagtctgtttcgt
cgtctgaaattgaattacgcaatttttgatgagggccatatgctgaagaatatgggctcc
atccgctaccagcaccttatgacaattaatgcaaataaccgtttgctgctcacaggcaca
cctgtgcagaataacctgttagaactcatgtcgctgttgaattttgttatgccgcacatg
ttcagtagtagcaccagtgaaatacgaagaatgttttcttctaagacaaaatcagcagat
gagcaaactatatatgaaaaggagagaatagcacatgcaaaacaaattataaaaccattt
attctcagaagagtaaaagaagaggttctcaagcagctaccccccaagaaagatcgaatt
gagttgtgtgcaatgtcagagaagcaggagcaactctatttgggtcttttcaacagattg
aaaaaatctatcaataacatggaaaaaaacacagaaatgtgcaatgtcatgatgcagttg
agaaaaatggccaatcatcctttattacatcgccaatattacacagctgaaaaactcaag
gaaatgtctcagcttatgctaaaggaacctacacattgtgaggctaaccctgacctgatc
tttgaagatatggaagttatgacagactttgaattacatgtactttgtaaacagtatcga
cacattaataacttccagttagacatggacttgattttagattctggaaaatttcgagtt
ttaggctgcatcttgtctgaattgaaacagaagggtgatagagttgtattatttagccaa
tttaccatgatgctggatattttagaggttctcttaaaacatcatcagcataggtacctc
agattagatggaaagactcagatttctgaaaggattcatctaattgatgagtttaatacc
gatatggatatctttgtgtttctgctgtcaacaaaagctggtggcctaggaataaacctg
acttcagcaaatgttgttatacttcacgatattgactgtaatccttacaatgacaaacaa
gcagaagatagatgccatagagtaggccagactaaagaagtactagttataaaattaata
ggccaagggacaatcgaagaatccatgctaaaaattaatcaacagaaattgaaactagaa
caagatatgaccacagtagatgaaggtgacgaagggagtatgccagcagatatagccaca
ttactaaaaacatcaatgggcctgtga
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