Globicephala melas (long-finned pilot whale): 115858108
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Entry
115858108 CDS
T11080
Symbol
PKD2
Name
(RefSeq) polycystin-2 isoform X3
KO
K04986
polycystin 2
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gmf03037
]
115858108 (PKD2)
04040 Ion channels [BR:
gmf04040
]
115858108 (PKD2)
Cilium and associated proteins [BR:
gmf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
115858108 (PKD2)
Ion channels [BR:
gmf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115858108 (PKD2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
SU10_portal
Motif
Other DBs
NCBI-GeneID:
115858108
NCBI-ProteinID:
XP_030721565
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All DBs
Position
5:complement(132319567..132368414)
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AA seq
974 aa
AA seq
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MVNSSRVQPQQPGDAKRTPAPRAAGPGRLMAGGRAAGAGFAGPGGLREQRGLEIEMERIR
QAAARDPPAGASASPSPPLSSCSRQAWSRDNPGFEAEEEEEEEEVEGEEGGMVVEMDVEW
RPGSRRSVASSAVSSVCARGRGLGGYHGAGPPNGRRRQREDQGPPSPSPAGGGGGGGDPL
HRHLPLDGQLPRVAWAERLVRGLRGLWGTRLMEESSADREKHLKSVLRELATYLLFLIVL
CILTYGMMSSSVYYYTRIMSQLFLDTPVSKTEKTNFKTLSSVEDFWKFAEGALLDGLYWK
MQPSNRTEGDDRSFIYYENLLLGVPRIRQLRVRNGSCSIPLDLRDEIKECYDVYSVSSED
RAPFGPRNGTAWIYTSEKDLNGSSHWGMIATYSGAGYYLDLSRTREETATQIANLKKNGW
LDRGTRATFIDFSVYNANINLFCVIRLLVEFPATGGVIPSWRFQPVKLIRYVTTFDFFLA
ACEIIFCFFILYYMVEEILEIRIHKLHYFRSFWNCLDVVIIVLSVVAAGINIHRTSNVEV
LLQFLEDQSAFPNFENLAYWQIQFNNIAAVIVFFVWIKLFKFINFNRTMSQLSTTMSRCA
KDLFGFAIMFFIIFLAYAQLAYLVFGTQVDDFSTFQECIFTQFRIILGDVNFAEMEEANR
VLGPIYFTTFVFFMFFILLNMFLAIINDTYSEVKSDLAQQKAEMELSDLVRKGYHKALVK
LKLKKNTVDDISESLRQGGGKLNFDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTERE
HQQMRDDLEKEREDLDLDHSSLPRPMSSRSFPRSLDDSEEDDDEDSGHSSRRRGSISSGV
SYEEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLEIMERAKLKRREVLGRLLDGVAEDERL
GRDSEIHREQMERLVREELERWESDDASSQISHGVGTPVGLNGQPRPRSSRPSSSQSAEG
MEGGGGNGSSNIHV
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggtgaactcgagccgcgtgcagccgcagcagcccggggacgcgaagcggacgccggcg
ccccgagcggcgggcccgggccggctgatggcgggcgggcgggccgcgggcgccggcttc
gccggcccgggcggcctccgcgagcagaggggcctggagatcgagatggagcgcatccgg
caggcggccgcgcgggaccccccggccggagcctcggcttccccatctcctccgctctcg
tcgtgctcgcggcaggcgtggagccgcgacaacccgggcttcgaggccgaggaggaggag
gaggaagaggaggtggagggagaagaagggggaatggtggtggagatggacgtagagtgg
cgcccgggcagccggaggtcggtcgcctcctcagctgtgagctctgtgtgcgccaggggc
agggggctggggggctaccacggcgcgggccctccgaacgggaggcggcgccagcgagag
gaccagggcccgccgagccccagcccggctggcggcggcggcggcggcggggacccgctg
catcgccacctccccctggacgggcagctgccgcgagtggcctgggccgagaggctggtt
cgcgggctgcgaggtctctggggaacaaggctcatggaggaaagcagcgctgaccgagag
aaacacctgaaaagtgttttacgggaactggccacgtatctcctttttctcatagtcttg
tgcatcctgacctatgggatgatgagctccagtgtgtactactatacccggatcatgtcc
cagctcttcctggacaccccggtgtccaaaacggagaaaactaactttaaaactctttct
tcagtggaagacttctggaagtttgcagaaggcgctttgttggacgggctctactggaag
atgcaacccagcaacagaacggaaggcgacgaccgaagcttcatctactacgagaaccta
ctcttaggggtaccacgtatacggcaactcagagtcagaaacggatcctgttccatcccc
ctggacttgagagatgagattaaagagtgctatgatgtctactctgtcagcagtgaagac
agggctccattcggtccgagaaatggaaccgcttggatctacacaagtgaaaaagacttg
aatgggagcagccactggggaatgatcgcaacttacagcggagctggttattacctggat
ctgtcgagaacaagagaggaaacagccactcagattgctaacctcaagaaaaacggctgg
ctggaccggggaacccgggcaacttttattgacttttcagtgtacaatgccaacatcaat
ctgttctgtgtgatcaggttactggtcgaattcccggcaacaggcggtgtgattccgtct
tggcggtttcagcctgtaaaactgatccgatacgtcacgactttcgatttcttcctggca
gcctgtgagattatcttttgtttctttatcctttactacatggtggaagagatactggaa
atccgcattcacaagctgcactatttccggagtttctggaattgtctggatgttgtgatc
attgtgctgtcagtggtagctgcaggaatcaacatacacagaacatcgaatgtggaggtg
ctcctccagtttctagaagatcaaagtgctttccccaactttgagaatctggcatactgg
caaatacagttcaacaacatagctgctgtcatagtattttttgtctggattaagctcttc
aaattcatcaactttaacaggaccatgagtcagctctccacaaccatgtctcggtgtgcc
aaagacctctttggctttgcaattatgttcttcattattttcttagcgtacgctcagttg
gcataccttgtctttggcactcaggttgatgacttcagtactttccaagagtgtatcttc
actcaattccgtatcattttgggtgacgtcaacttcgcagagatggaggaagctaatcga
gttttgggaccaatctatttcactacgtttgtgttctttatgttcttcatcctgttgaat
atgtttttggccatcatcaatgatacctactctgaagttaaatctgatttggcccagcag
aaagcggaaatggaactctcggatcttgtcagaaagggctaccataaagccttggtcaaa
ctaaaactgaagaaaaataccgtggatgacatttcagagagtctgcggcaagggggaggc
aagttaaactttgatgaacttcgacaagatctcaaagggaagggccatactgatgcagag
attgaggcaatattcaccaagtacgaccaggatggagaccaagaactgacagaacgtgag
caccagcagatgagagacgacctggaaaaagagagggaggacctggacttggatcacagc
tctttaccacgccccatgagcagccgaagtttccctcgaagcctggatgactctgaggag
gatgatgatgaagacagtgggcatagctccagaaggaggggaagcatctccagtggggtt
tcttatgaagagtttcaagtcctagtgagacgggtggaccgaatggaacactccatcggc
agcattgtgtccaagattgatgctgtgatagtgaagctggagatcatggagcgggccaaa
ctgaagagaagggaggtgctgggaaggctgctggatggagtggctgaggatgaaaggctg
ggtcgtgacagtgaaatccacagggaacagatggaacgattggtgcgggaagagttggaa
cgctgggaatccgatgatgcctcttcccaaataagtcacggtgtaggcacaccggtggga
ctaaatggtcagcctcgccccaggagctcccgcccttcttcctcccaatctgcagaagga
atggaaggtggaggtggaaacgggagttccaatatccacgtgtag
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