Globicephala melas (long-finned pilot whale): 115858261
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Entry
115858261 CDS
T11080
Symbol
CTH
Name
(RefSeq) cystathionine gamma-lyase isoform X3
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf00260
Glycine, serine and threonine metabolism
gmf00270
Cysteine and methionine metabolism
gmf00450
Selenocompound metabolism
gmf00670
One carbon pool by folate
gmf01100
Metabolic pathways
gmf01230
Biosynthesis of amino acids
Module
gmf_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
115858261 (CTH)
00270 Cysteine and methionine metabolism
115858261 (CTH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
115858261 (CTH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
115858261 (CTH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmf04147
]
115858261 (CTH)
Enzymes [BR:
gmf01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
115858261 (CTH)
Exosome [BR:
gmf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115858261 (CTH)
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Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
GDC-P
Motif
Other DBs
NCBI-GeneID:
115858261
NCBI-ProteinID:
XP_030721802
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All DBs
Position
1:complement(127371223..127394554)
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AA seq
405 aa
AA seq
DB search
MQEKDASPHGFLPRFQHFATQAIHVGQEPEQWTSHAVVPPISLSTTFKQGAPGRHLGFEY
SRSGNPTRNCLEKAVAALDGAKYSLAFASGLAATVTVTHLLKAGDQIICMDDVYGGTNRY
FRQVATEFGLKISFVDCSKTKLLEAAITPETKLVWIETPTNPILKMIDIEACAHTVHKHG
DIILVVDNTFMSAYFQRPLALGADICMYSATKYMNGHSDVVMGLVSLNSERLHDRLRFLQ
NSLGAVPSPIDCYLCNRGLKTLQIRMEKHFENGMAVAQFLESNPWVEKVIYPGLPSHPQH
ELAKRQCTGCPGMITFYIKGSLQHAETFLKNLKLFTLAESLGGYESLAELPAIMTHASVP
KSDREVLGISDTLIRLSVGLEDKQDLLDDLDQALKAAHSPNASHN
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaaaagacgcctccccacacggtttcctgcctaggttccaacatttcgctacg
caggccatccatgtgggccaggaaccagagcaatggacttcccacgctgtagtgcctccc
atctcactgtccaccacgttcaagcaaggggctcctggccggcacttgggttttgagtac
agccgttctggaaatcccaccaggaattgcttggaaaaagcagtggcagcactggatggg
gctaagtacagtttggcctttgcttcaggtttagcagccactgtgactgttacccatctc
ttaaaagcaggagaccaaattatttgtatggatgatgtgtatggaggtacaaacaggtac
ttcaggcaggtggcaactgaatttggattaaagatttcttttgttgattgttcaaaaacc
aaattgttagaggcagctattactccagaaaccaagcttgtttggattgaaactcccaca
aaccctatcttgaagatgattgacattgaagcctgtgcacatactgtccataaacatgga
gacattattttggtcgtggataacacttttatgtcggcatatttccagcggcctttggct
ctgggagctgatatttgtatgtattcagcaacaaaatatatgaatggccacagtgatgtt
gtgatgggcttagtgtcacttaattctgagaggcttcatgataggctccgattcttgcaa
aattctcttggagcagttccatctcctattgactgttacctctgcaatcgaggtctgaag
actctacaaatccgcatggagaagcatttcgaaaatggaatggcagttgctcagtttttg
gagtcgaatccttgggtagaaaaggttatttatcccggactgccctctcatcctcagcat
gagctggcaaagcgtcagtgcacaggttgcccagggatgatcaccttttatatcaagggc
tcccttcaacatgctgagactttcctcaagaacctaaagctatttacactggctgagagc
ttaggaggatatgaaagtcttgctgagcttccggcaatcatgacccatgcttcagtgcct
aagagcgacagagaagtccttggaattagtgacacactgattcgactctctgtgggctta
gaggataaacaagacctactggatgatctagatcaagctttgaaggcagcacactctcca
aatgcaagtcacaactag
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