Globicephala melas (long-finned pilot whale): 115858278
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Entry
115858278 CDS
T11080
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmf03036
]
115858278 (MSH4)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Meiosis-specific proteins
Others
115858278 (MSH4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_23
AAA_22
ATPase_2
AAA_28
AAA_21
nSTAND3
Motif
Other DBs
NCBI-GeneID:
115858278
NCBI-ProteinID:
XP_030721833
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All DBs
Position
1:complement(122227818..122324457)
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AA seq
934 aa
AA seq
DB search
MLRPEIPPTSPSVPAVSSSSVEARSQGPRYNFGLQETPQRCPSAQAASSSSPPGTSGAAG
DRSGSSSLPRHPPSARPAQDSYFTNKRSYAENTLASHFTLGTSSSSARDSNYPQILKTPL
SAGNPQRPGYKSWTLQMEYSATSSSAVSAHSPSVIVAVVEGRGLARGEIGMASIDLKSPQ
IILSQFADNTTYAKVITKLKILSPLEIIMSNTACVVGNSTKLFTLITENFKNVNFTTIQR
KYFNETKGLEYIEQLCITEFSTVLMEVQSKYYCLAAVAALLKYVEFIQNSVYAPKSLKIC
FQGSEQTAMIDSSSTQNLELIINNQDSRSSHTLFGVLNYTKTPGGSRRLRSNILEPLIDV
ETINMRLDCVQELLQDEELFFGLQSVLARFLDTEQLLSVLVQIPKQDTITAAESKITNLI
YLKHTLELVDPLKITLKNCNTPLLRAYYGSLEDKRFVIILDKIKTVINDDARYMKGCLNM
RTQKCYAVRSNINEFLDIARRTYTEIVDDIAGMISQLAEKYSLPLRTSFSSARGFFIQMT
TDCTALPNDQLPSEFIKISKVKNSYSFTSADLIKMNERCQESLREIYHMTYMIVCKLLSE
IYEHIHCLHKLSDTVSMLDMLLSFAHACTLSDYVRPEFTDTLAIKHGWHPILEKISVEKP
VANNTYITEGSNFFIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYASFRIAEQIFTR
ISTDDDIETNSSTFMKEMKEIAYILHNANDKSLILIDELGRGTNTEEGIGICYAVCEYLL
SLKAFTLFATHFLELCHIDVLYPNVENVHFEVQHVKNTSRNKEAILYTYKLSKGLTEEKN
YGLKAAEVSSLPPSIVLDAKEITSQITRQILQSQRSTPEMERQRAVYHLATRLVQTARNS
QLDPDSLRTYLSNLKKKYEADFPRAEQVSGITEE
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggcctgagatcccaccaacttcgccttctgtccctgcggtttcctcttcctcg
gtagaggctcggtcccagggtccccgctacaatttcggactccaggagactcctcagaga
tgtccttcagcccaggccgcctcttcgtcctcccctccaggcacgtctggagcggcgggc
gaccggagcggcagcagcagcctccctcggcacccgcccagcgcgcggccagctcaagat
tcatactttacaaacaaaagatcttatgcagaaaacacacttgcatcacattttactctc
ggtacaagctcatcctctgcgcgagatagtaattatcctcaaatactaaaaactccatta
tctgctggaaatccccagagaccaggttataaaagttggacactgcaaatggaatattca
gctacatcctcatctgcagtttctgcacactctccatcagttattgtagctgttgtagaa
gggagaggacttgccagaggtgaaataggaatggcaagtattgatttaaaaagcccacaa
attatattatctcagtttgcagacaacacaacatatgcaaaggtgatcactaaactcaaa
attttatcacctttggaaataataatgtcaaatactgcttgtgttgtggggaattcaacc
aagttgtttactctcatcacagaaaatttcaagaacgttaatttcactactatccaaagg
aaatacttcaatgaaacaaaaggattagagtacattgaacaattatgcataacagaattc
agcactgtcctaatggaggttcaatccaagtattactgccttgcagctgttgcagcttta
ttaaaatatgttgaatttattcaaaattcagtttatgcaccaaaatcgctgaagatttgt
ttccagggtagtgaacagacagctatgatagattcatcatcaacccaaaaccttgaatta
ataattaataatcaagactctaggagcagtcacacactctttggtgttctaaattacact
aagactcctggaggaagtagaagacttcgttctaatatattagaacctctaattgatgtt
gaaaccattaacatgaggttagattgtgttcaagaactgcttcaagatgaggaactcttt
tttggacttcagtcagttttagcaagatttcttgatacagagcagcttctttctgtttta
gtccaaattccaaagcaagacacgattactgcagctgaatcaaagataacaaatttaata
tacctaaaacataccttggaactcgtggatcctttaaagattactctgaagaactgtaac
acacctttattaagagcttactatggttccttggaagataagaggtttgtaatcatactt
gacaagattaaaacagtaattaatgatgatgcaagatacatgaaaggatgcctgaacatg
aggactcagaagtgctatgcagtgaggtctaacataaatgaatttcttgacatagccaga
agaacatatacagagattgtagatgacatagcaggaatgatatcgcagcttgcagaaaag
tatagtcttcctttaaggacaagttttagctctgctcgaggatttttcattcagatgact
acagactgtacagccctacccaatgatcagcttccttcagagtttattaagatttctaaa
gtgaaaaattcttacagctttacatcagcagatttaattaaaatgaatgaaagatgccaa
gagtctttgagagaaatctatcacatgacttacatgatagtgtgcaaactgcttagtgag
atttatgaacatattcattgcttacataaactgtctgacactgtgtcaatgctggatatg
ctactgtcatttgctcatgcctgcactctttctgactatgttcggccagagtttactgat
actttagcaatcaaacatggatggcaccccatacttgaaaaaatatctgtggaaaaacct
gttgccaacaatacctatattacagaagggagtaatttttttatcataactggaccaaat
atgagtgggaaatccacatatttgaaacagattgctctttgtcagattatggcccagatt
ggatcatatgttccagcagaatatgcttcctttagaattgctgaacagatttttacaaga
ataagtactgatgatgatattgaaacaaattcatcaacatttatgaaggaaatgaaagag
atagcatatattctacataatgctaatgacaaatcactcatattaattgatgaacttggc
agaggtactaatacagaagaaggtattggcatttgttacgctgtttgtgaatatctgctg
agcttaaaggcgtttacactgttcgctacacatttcctggaactatgccatatagatgtt
ctatatcctaatgtagaaaacgtccattttgaagttcaacatgtaaagaacacctcaaga
aataaagaagcaatcttgtatacctacaaactttctaagggacttacagaagaaaaaaat
tatggattaaaagctgcagaggtgtcatcactcccaccatcaattgtcttggatgccaaa
gaaatcacaagtcaaataaccagacaaattttgcaaagccaaaggagtacccctgagatg
gaaagacagagagctgtgtaccatctagctactaggcttgttcaaactgctcgaaactct
cagttggatccagacagtttacgaacatatttaagtaatctcaaaaagaaatatgaagca
gattttcccagggctgaacaagtttcaggaatcactgaagaataa
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