Globicephala melas (long-finned pilot whale): 115858873
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Entry
115858873 CDS
T11080
Symbol
TRAIP
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP isoform X1
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmf04121
]
115858873 (TRAIP)
Enzymes [BR:
gmf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115858873 (TRAIP)
Ubiquitin system [BR:
gmf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115858873 (TRAIP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-C3HC4_4
zf-ANAPC11
zf-RING_Vps41
zf-RING_UBOX
zf-C3HC4_3
zf-RING_11
MscS_porin
OVT1
zf-RING_16
FAA_hydro_N_2
HIP1_clath_bdg
zf_RING_Vps8
Sec3_CC
HMMR_N
WEMBL
Laminin_II
DUF3450
Crescentin
RINGv
DUF745
Zn_ribbon_8
zf-RING-like
GAS
CCDC93_CC
Motif
Other DBs
NCBI-GeneID:
115858873
NCBI-ProteinID:
XP_030723025
LinkDB
All DBs
Position
11:38382282..38409593
Genome browser
AA seq
471 aa
AA seq
DB search
MPIRALCTICSDFFDHSRDVAAIHCGHIFHLQCLIQWFETAPSRTCPQCRIQVGKRTIIN
KLFFDLAQEEESVLDAEFLKNELDNTRALLSQKEKEKRDGQLIIDTLRDTLEERNATVES
LQKALDKAEMLCSTLKKQMKYLEQQQDETKQAREEARRLRNKMKTMERIELLLQSQRPEV
EEMIRDMGVGQSAVEQLAVYCVSLKKEYENLKEARKASGELADKLKKDLFSSRSKLQTVY
SELDQAKLELRSAQKDLQSADKEIASLRKKLTMLQETLNLPPVDSEAVNRLVLESPAPVE
MLNLKLRRPAFGDDIDLNATFNVDTPPAQPSSTQHGHAKRLFPEKAHSPVQDVLKKMPKG
PKQESQLLLGGQRCLGEPDEELAGAFPVFIRNAVLGQKQTKRTRAEPCRSTDAVRTGFDG
LGGRTKFIQPTDTTMIRSLPVKPKPKARAKQRLGARTVLPPSQAKLDTFLW
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccgtgctctgtgtaccatttgctctgacttcttcgatcactcccgcgacgtg
gccgccattcactgcggccacatcttccacttgcagtgcctaattcagtggttcgagaca
gcaccaagtcggacctgcccgcagtgccgaatccaggtcggtaaaagaaccattatcaat
aagctcttctttgaccttgcccaggaggaggagagtgtcttagatgcagaattcttaaag
aatgaactggataataccagagctctgctttcccagaaagagaaggaaaaacgagacggc
cagcttatcattgacactctgcgggacacgctggaagaacgcaacgccactgttgaatcc
ctgcagaaggccttagacaaggctgagatgctgtgctccaccctcaagaagcagatgaag
tacttggaacagcagcaggatgagaccaaacaagcacgggaggaggcccgccggctccgg
aacaagatgaagaccatggagcgaattgagctcctactccagagtcagcggcccgaggtg
gaggagatgatccgcgacatgggtgtgggacagtcagcggtggagcagttggctgtgtac
tgcgtgtccctcaagaaagagtacgagaatctaaaagaggcgcggaaggcctcaggggag
ctagccgacaaactgaagaaggatttgttttcttccagaagcaagttgcagacagtctac
tctgaactggaccaggccaagttggagctgaggtcggcccagaaggacttacagagtgct
gacaaggaaatcgcaagcctgagaaaaaagctaacgatgctgcaggaaaccctgaacctg
ccaccagtggacagtgaggctgtcaaccgcctggttttagagagcccagctcctgtggag
atgctgaacctgaagcttcgccggccagccttcggcgatgatattgacctcaatgccacc
tttaatgtggatactcccccagcccagccctccagcacccagcatggccatgccaagagg
ctcttcccagagaaggcacattctcccgttcaggacgttctcaagaagatgcccaaaggc
cccaagcaggagtcccagctcttgctgggtggccagcgctgtctgggagagcctgatgag
gagctggctggtgccttccctgtcttcatccggaatgctgtcctgggccagaaacagacc
aagaggaccagggcagagccctgtcgcagcacagatgcagtaaggactggcttcgatgga
cttggaggccggacaaaattcatccagcctactgacacgactatgatccgctcactgccc
gttaaacccaagcccaaggccagggctaagcagagactgggggccaggacagtgctccct
ccctcccaggccaagctggacaccttcctgtggtag
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