KEGG   Globicephala melas (long-finned pilot whale): 115858920
Entry
115858920         CDS       T11080                                 
Symbol
RRP9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
gmf  Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gmf03009]
    115858920 (RRP9)
Ribosome biogenesis [BR:gmf03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    115858920 (RRP9)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_Gbeta WDR55 EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_IFT122_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_Aladin Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_ACSF4 Beta-prop_SPT8 Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_Vps41 WD40_like RGM_C WDR54 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 115858920
NCBI-ProteinID: XP_030723174
LinkDB
Position
11:36746959..36754477
AA seq 475 aa
MSATGAVRKRGKPASGAGAGAGAGKLRRKGDSSGDKGKSKGGGKMNEEISSDSETESLVP
RRNEEEEAEELEETAQEKKLRLAKLYLEQLKQQEEEKAEAREFEEDQVAGRLKEDVLEQR
GRLQKSVAKEIQAPDPADIRILRGHQLSITCLVITPDDLAIFSAAKDCTIIKWSVESGRK
LHVIPRAKKGAEGQPSGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGH
RDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVTA
GGRDGTVRVWKIPEESQLVFYGHQGSIDSIQLINEEHMVSGADDGSVALWGLSKKRPLAL
QREAHGLRGELGLEQPFWVSSVAALLNTDLVATGSHSNSVRLWQCGEGFRQLDLLCDIPL
VGFINSLKFSSAGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLHRAPRPPTAGS
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgtcggcgactggggcggttcgaaagaggggaaagccggcctcgggggccggggctggt
gcgggggccggcaagttgcggcgaaagggcgactcttctggggacaagggcaagtccaag
ggtggcggcaagatgaatgaggagatctccagcgactcggagactgagagcctagttccc
aggaggaatgaggaggaggaggcggaggagctggaggagaccgcacaggagaagaagctg
cgcttggccaagctctaccttgagcagctcaagcagcaagaggaggagaaggccgaggcc
cgcgaatttgaggaggaccaggtggcagggaggctgaaggaggacgtgctcgagcagaga
ggcaggctgcagaagtcggtggcaaaggagatccaggccccagaccctgctgacattcga
atcttacggggccaccagctgtccatcacatgtttggttatcacccctgacgacctggcc
atcttttctgccgccaaagactgcaccattattaagtggagtgtggaaagtggacggaag
cttcatgtgatccctcgagccaagaagggtgccgaggggcagccctccggccatagtagc
cacgtcctctgcatggccatctcctccgatggcaagtacctggcctcgggtgaccgcagc
aagctcattctcatttgggaggcccagagctgccagcacctgtacaccttcacgggacac
cgggacgccgtgtcggggctggcattccgcagaggcacccaccagctctacagcacgtcc
cacgaccgctctgtgaaggtgtggaatgtggcggagaactcctacgtggagacgctcttc
gggcaccaggatgctgtggctgcactggatgctctgagcagggagtgctgcgtgaccgcc
gggggccgggacgggaccgtgcgtgtgtggaagatccccgaggagtcccagcttgtcttc
tacggccaccagggctccattgacagcatccagctcatcaacgaggagcacatggtgtcg
ggtgcagacgatggttctgtagccttgtggggcctctctaagaagcggccacttgccctg
cagcgtgaggcccatgggctgcggggggagctgggcttggagcagcccttctgggtgtca
tcggtggcagccttgctcaacacggacctcgtggccacaggctctcacagcaactctgtg
cggctctggcaatgcggggagggcttccggcagcttgaccttctctgcgacatccccctg
gtgggctttatcaatagcctcaagttctccagtgctggggacttcctggtggccggggta
gggcaggagcacaggcttggccggtggtggcggatcaaagaggcccggaactctgtctgc
atcatccctctccacagggcccccaggccccctactgctggctcctga

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