Globicephala melas (long-finned pilot whale): 115858936
Help
Entry
115858936 CDS
T11080
Symbol
POC1A
Name
(RefSeq) POC1 centriolar protein homolog A isoform X1
KO
K16482
centriolar protein POC1
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmf03036
]
115858936 (POC1A)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gmf03037
]
115858936 (POC1A)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
115858936 (POC1A)
Cilium and associated proteins [BR:
gmf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
115858936 (POC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_Vps41
WD40_RFWD3
eIF2A
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
Beta-prop_Nup120_160
Ge1_WD40
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_2nd
PROPPIN
Motif
Other DBs
NCBI-GeneID:
115858936
NCBI-ProteinID:
XP_030723199
LinkDB
All DBs
Position
11:36506193..36601338
Genome browser
AA seq
475 aa
AA seq
DB search
MEPAIQLSFQSGGKKPRRRVSFNRGGRGEAKRPALLLAAVGGAETERDETAAAASSGFSG
ALGAPGPAMAAPCLEDPSLERHFKGHRDAVTCVDFSLNTKQLASGSMDSCLMVWHMKPQS
RAYRFAGHKDTVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTMFRAHTATVRSIHFC
SDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKVW
DKTSRECVHSYCEHGSFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV
NALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD
EQVMVWKSNFDVVNYGEVPRVQRPPATLASSSRTLPEVDSPVPPDRGRSQESMQSQPQEP
VSIPQTLTSMLEHIVGQLDVLTQTVSILEQRLTLTEDKLKQCLENQQLIMQRTPP
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggagccggccatacagctctccttccagtcggggggcaaaaagccgaggcgccgcgtc
tcctttaaccgcggtgggcggggcgaggcgaagcgacccgcgttgctattggcggcggtt
gggggcgcggaaactgaacgggacgaaactgcagccgctgcttcttcgggcttctctggc
gccttgggcgcccctggacccgccatggccgcaccctgcctggaggacccctcgctggag
aggcattttaagggccaccgggatgcagttacctgtgtggacttcagcctcaacacgaag
cagctggccagtggctccatggactcatgcctcatggtgtggcacatgaagccccagtca
cgtgcctaccgcttcgccggccacaaggacaccgtcacctgtgtgaacttctccccttcg
ggacacctgcttgcctcaggctcccgtgacaagactgtccgcatctgggtacccaacgtc
aaaggcgagtcaaccatgtttcgtgcacacacggccacagtgaggagcatccatttctgc
agcgatggccagtccttcgtgacagcctccgacgacaagacagtcaaggtgtggtcaact
catcgccagaaattcctgttttccctgagccagcacatcaactgggtccgctgtgccaag
ttctccccggatgggcggctcatcgtgtctgccagtgatgacaagactgtcaaggtgtgg
gacaagactagccgggagtgtgtccactcatactgtgagcacggcagctttgtcacctac
gtggacttccaccccagcggcacgtgcatcgccgccgccggcatggacaacacggtgaag
gtgtgggacgtgcggactcaccggctcttgcagcactatcagttgcacagtgcagcggtg
aacgccctctccttccacccgtcgggaaactacttggtcacggcctccagcgactcaacc
ctgaagatcctggacctcatggagggccggctgctctacacgctccatgggcatcagggt
ccagccaccactgttgccttttcaagaacgggggagtattttgcttctggaggttctgat
gaacaagtaatggtttggaagagtaactttgatgttgtcaattacggagaagtcccaaga
gtgcagaggcccccggccacgctggccagctcctccaggactctgccagaagtggattcc
cccgtcccaccagacaggggcaggagtcaggagtcgatgcagagccagccccaagagccc
gtcagcattccccagacactgaccagcatgctggagcacattgtaggccagctggacgtc
ctcacccagacagtctccatcctggagcagcggttgacactgacagaagacaagctgaag
cagtgtctggagaaccagcagctaatcatgcagagaacaccaccatga
DBGET
integrated database retrieval system
