KEGG   Globicephala melas (long-finned pilot whale): 115859049
Entry
115859049         CDS       T11080                                 
Symbol
THOC7
Name
(RefSeq) THO complex subunit 7 isoform X1
  KO
K13176  THO complex subunit 7
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf03013  Nucleocytoplasmic transport
gmf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115859049 (THOC7)
  09122 Translation
   03013 Nucleocytoplasmic transport
    115859049 (THOC7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmf03019]
    115859049 (THOC7)
   03041 Spliceosome [BR:gmf03041]
    115859049 (THOC7)
Messenger RNA biogenesis [BR:gmf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     115859049 (THOC7)
Spliceosome [BR:gmf03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    115859049 (THOC7)
SSDB
Motif
Pfam: THOC7 UPF0193 OVT1 DASH_Dad2 Zw10_N EcoEI_R_C ZapD
Other DBs
NCBI-GeneID: 115859049
NCBI-ProteinID: XP_030723489
LinkDB
Position
11:26048436..26069459
AA seq 204 aa
MGAVTDDEVIRKRLLIDGDGAGDDRRINLLVKSFIKWCNSGSQEEGYSQYQRMLSTLSQC
EFSMGKTLLVYDMNLREMENYEKIYKEIECSIAGAHEKIAECKKQILQAKRIRKNRQEYD
ALAKVIQRHPDRHETLKELEALGKELEHLSHIKESVEDKLELRRKQFHVLLSTIHELQQT
LENDEKLSEAEEAQETSMETDPKP
NT seq 615 nt   +upstreamnt  +downstreamnt
atgggagccgtgactgacgacgaagtcatacggaagcgtctcctaattgatggagatggt
gctggagatgatcggagaattaatctgctagtgaaaagtttcattaaatggtgcaactct
ggatcccaggaagaaggatacagccagtaccagcgtatgctgagcacactgtcccaatgt
gaattttcaatgggcaaaactttgctggtatatgatatgaatctcagagaaatggaaaat
tatgaaaaaatttacaaagaaatagaatgtagcattgctggagcacatgaaaaaattgct
gagtgcaaaaagcaaattcttcaagcaaaacgaatacgaaaaaatcgccaagaatatgat
gcattggcaaaagtgatccagcgtcatccagacaggcatgagacattaaaggaactagag
gctctgggaaaagaattagagcatctttcacatattaaagaaagtgttgaagataagcta
gaattgagaaggaaacagtttcacgttcttcttagtaccatccacgaacttcagcaaaca
ctggaaaatgatgaaaagctctcagaggcagaagaagctcaagaaacaagcatggaaact
gatcctaaaccatag

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