Globicephala melas (long-finned pilot whale): 115859242
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Entry
115859242 CDS
T11080
Symbol
MYO5B
Name
(RefSeq) unconventional myosin-Vb isoform X2
KO
K10357
myosin V
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
115859242 (MYO5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115859242 (MYO5B)
04131 Membrane trafficking [BR:
gmf04131
]
115859242 (MYO5B)
03029 Mitochondrial biogenesis [BR:
gmf03029
]
115859242 (MYO5B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gmf04812
]
115859242 (MYO5B)
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
115859242 (MYO5B)
mRNA cycle factors
P-body specific factors
115859242 (MYO5B)
Membrane trafficking [BR:
gmf04131
]
Others
Actin-binding proteins
Myosins
115859242 (MYO5B)
Mitochondrial biogenesis [BR:
gmf03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
115859242 (MYO5B)
Cytoskeleton proteins [BR:
gmf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
115859242 (MYO5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
nSTAND3
Myosin_N
AAA_16
DUF1515
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
115859242
NCBI-ProteinID:
XP_030723765
LinkDB
All DBs
Position
13:complement(6385806..6774609)
Genome browser
AA seq
1819 aa
AA seq
DB search
MSVSELYSQYTRVWIPDPDEVWRSAELTKDYKEGEKSLQLQLEDETIREYPIDVQSNQLP
FLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYG
QDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYF
AAVSGSASDTNIEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDKRYRIIGANMR
TYLLEKSRVVFQADDERNYHIFYQLCAAANLPEFKELALTRAEDFFYTSQGGDTSIEGVD
DAEDFEKTRQAFTLLGVRESHQINIFKIIASILHLGNVEIQAERDGESCSISPKDEHLSN
FCQLLGVEHSQMEHWLCHRKLVTTSETYVKTMSLQQVVNARNALAKHIYAQLFGWIVGHV
NKALHTSLKQHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHSGSQHFQK
PRMSNTAFIVVHFADKVEYLSDSFLEKNRDTVYEEQINILKASKLPLVADLFHDGKDSAP
AAATSSKISVRSARPPLKASNKEHKKTVGHQFRTSLHLLMETLNTTTPHYVRCIKPNDEK
LPFRFDPKRAVQQLRACGVLETIRISAAGYPSRWAYHDFYNRYRVLVKKKELANTDKKAI
CKSVLESLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFRAATIMIQKTVRGWLQKVKY
RRLKAATLTLQRYCRGHLARRLAEHLRRTRAAVVLQKQYRMRRAHQAYQRVRRATVVIQA
FARGMFVRRIYHQVLREHKATIIQKHVRSWLARRCFQRLRGAAIVIQCGFRRLKAKRELK
ALKIEARSAEHLKRLNVGMENKVVQLQRKIDDQNKEFKMLSEQLSAITSTHATEVEKLKE
ELACYQQSQGGDSSPQLQEEVESLRTELQRAHSERKVLEDAHTREKDELRKRVADLEQEN
ALLKDEKAQLNNQILCQSKDELAQTSVEENLLMKKELEEERSRYQNLVKEYSRLEQRYDN
LRDEMTIIKQTPGHRRNPSNQSSLESDSNYPSISTSEVGDAEDALQQVEEIGLEKAAMDL
TVFLKLQKRVRELEQERKKLQVQLEKKEQQDSKKIPAELPSSDLDVDQDADLAYNSLKRQ
ELESENKKLKNELNELRKAVADQASEHSAAHGIPDSYCLLLNQLKLAHEELEVRKEEVLI
LRTQIVSADQRRLAGKGSEPNINARTSWPNSEKHVDQEDAIEAYHGVCQTNRLLEAQLQA
QSREHGEEVEGLKAQVQALKEEMDEQQQTFCQTLLLSPEAQLEFGIQQELSRLTNENLDL
KELVEKLEKNEKKLKKQLKIYMKKVQDLEAAQALAQSERRRHELTRQVTVQRKEKDFQGM
LEYHKEDEALLIRNLVTDLKPQALAGTVPCLPAYILYMCIRHADYVNDDLKVHSLLTSTI
NGIKKVLKKHNDDFEMTSFWLSNTCRLLHCLKQYSGDEGFMTQNTAKQNEHCLKNFDLTE
YRQVLSDLSIQIYQQLIKISEGLLQPMIVSAMLENESIQGLSGVKPTGYRKRTSSLADGD
NSYCLGAVIRQMNSFHTVMCDQGLDPEIILQVFKQLFYMINAVTLNNLLLRKDVCSWSTG
MQLRYNISQLEEWLRGRNLHQREVAETMEPLIQAAQLLQLKKKSPEDAEAICSLCTALST
QQIVKILNLYTPLNEFEERVTVAFIRTIQAQLQERNDPQHLLLDFKHTFPVLFPFNPSSL
TMDSIHIPACLNLEFLNEV
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcagcgagctctacagccagtacacaagggtctggatccctgaccccgatgaa
gtgtggcgctcagctgaattaaccaaggactacaaggagggtgagaagagcctccagctc
caactggaagatgaaactattcgggaataccccattgatgtccaaagcaaccagcttccc
ttcctgcggaatccagatatcctggtgggagaaaatgacctaactgcccttagctatcta
catgagcctgcagttttgcataacttaaaggtccgtttcctggagtccaaccatatctac
acttactgtgggatcgtgcttgttgccattaatccttacgaacagctgccaatctatggc
caagatgtcatctatgcctacagtggccaaaacatgggggatatggaccctcacatcttc
gctgtggccgaggaagcctacaagcagatggccagagacgagaagaaccagtccatcata
gtcagcggggagtctggagccggcaagaccgtgtcggccaagtacgccatgcgctatttt
gccgcggttagtggctcggccagtgacaccaacatcgaagagaaggtcctggcgtccagt
cccatcatggaggccattgggaatgctaaaaccactcgcaatgacaacagtagccgtttc
ggaaagtacattcagattggctttgacaagaggtaccgcatcattggggccaacatgagg
acctaccttttggagaagtccagagtggtctttcaggcagatgatgagaggaattaccac
atcttttaccagctctgtgcggctgccaatcttccggaatttaaagagctcgcactaacc
cgtgccgaggacttcttctatacgtcacagggaggagacacgtccatcgagggtgtagat
gacgctgaggactttgagaagacgcgacaagccttcacgctccttggagtgagagagtcc
catcagataaacatttttaagataattgcttccatcctacaccttggaaatgtggagatt
caagccgagcgcgatggtgaatcctgtagtatatcacccaaggatgaacacctgagcaac
ttctgccagctgctgggggtggagcacagtcagatggagcattggctgtgccatcgcaag
ctggtcaccacctcggagacctacgtcaagaccatgtccctgcagcaggtggtcaacgca
cgcaacgccctggccaagcacatctacgcccagctgtttggctggatcgtggggcatgtc
aacaaggccctgcacacctcgctcaagcagcactccttcatcggggtcctggacatctac
gggtttgagacatttgacgtgaacagctttgagcagttttgtatcaactatgcgaatgag
aagctccagcaacagttcaacttgcatgtattcaagttggagcaagaggaatacatgaag
gagcagatcccttggaccttgattgatttttatgataaccaaccttgtattgacctcata
gaagctaagctgggcatcttggacctgttggatgaagaatgtaaggtccccaaaggaact
gaccagaactgggctcagaagctctacgaccggcactccggcagccagcacttccagaaa
ccccgcatgtccaacacggccttcattgtcgtccactttgcagataaggtggagtacctt
tcagatagttttctggagaaaaacagagacacggtgtacgaagagcagatcaacattctg
aaggccagcaagctccccctggtggctgacttgttccacgatggcaaagactctgctcct
gctgccgccacatcttcaaagatcagcgttcgctctgccagaccccctctgaaagcctcc
aacaaggagcacaagaaaaccgtgggccaccagttccgcacctccctgcacctgctcatg
gagaccctgaacaccacaacgccgcactacgtccgctgcatcaagcccaacgacgagaag
ctccccttccgctttgacccgaagagagcagtgcagcagctccgagcgtgcggggtgttg
gagaccattcggatcagcgcggctggctacccgtccaggtgggcctaccatgacttctac
aaccggtatcgggtgctggtcaagaagaaagagctagccaacacagacaaaaaggccatc
tgcaagtccgtgctggagagcctcattaaggatcctgacaagttccagtttggccgcacc
aagatcttcttccgggcaggccaggtggcctacctggagaagcttcgggctgacaagttc
cgggcagccaccatcatgatccagaaaaccgtccggggctggctgcagaaggtgaaatac
cgcaggttgaaggcagctaccttaactctgcagaggtactgccgaggacacctggcccgc
aggctggccgagcatctgcggaggacccgggcggccgtggtgctccagaagcagtaccgc
atgcggagggctcaccaggcctaccagagggtccgcagggccaccgtcgtcatccaggcc
ttcgctcggggcatgtttgtacggagaatctaccaccaggtcctcagggagcacaaggcc
accatcatccagaagcacgtgcggagctggctggctcgcaggtgcttccagcggcttcgg
ggcgcggccattgtcatccagtgtggcttccggaggctcaaggccaagcgggagctgaag
gccctcaagattgaggcccgctcagcagagcacctaaaacgcctcaacgtgggcatggag
aacaaggtggtccagctgcagcggaagatcgacgaccagaacaaagagttcaagatgctg
tcggagcagctgtcagccatcacctccacacacgccacggaggtagagaagctgaaggag
gagctggcctgctaccagcagagccagggtggggacagcagcccgcagctgcaggaggag
gtcgagagcctgcggacagaactgcagagggcccactcggagcgtaaggtcctggaggac
gcccacacccgggagaaggacgagctgagaaagcgagttgccgacctggagcaagaaaat
gccctcctgaaagatgagaaggcacagcttaacaaccaaatcctgtgccaatctaaagat
gaacttgcccagacctccgtcgaggaaaacctcctgatgaagaaggagctggaggaggaa
cgctcccggtaccagaacctcgtgaaggaatattcccggctggagcagagatacgacaac
ctccgggacgagatgaccatcataaagcaaaccccaggccacaggcggaacccatcaaac
cagagtagcttagaatctgactctaattacccctccatctcgacatctgaggtcggagac
gcagaagatgccctccaacaggtggaggaaattggcctggagaaggcggccatggacctg
acagtgttcctgaagctgcagaagagggtgcgagagcttgagcaggagaggaagaaactg
caggtgcaactggagaagaaagaacagcaggacagcaagaaaatcccggcggaactgcca
agcagtgacttagatgtggaccaggatgcagatctagcctacaatagtctgaagaggcag
gagctggagtcggagaacaagaagctgaagaatgagctgaacgagctgaggaaagccgtg
gccgaccaagcctcagagcacagcgccgcccacggcatccctgacagctactgcctcctg
ctgaaccagctcaagctggcccacgaggagctggaggtgcgcaaggaggaggtgctcatc
ctgaggacccagatcgtgagcgccgaccagcgccgcctggctggcaagggctcggagcca
aacatcaatgccaggacgagttggcctaacagtgaaaagcacgtggatcaggaagacgcc
atcgaggcctatcacggggtctgccagacgaacaggttgctggaggcccagctgcaggct
cagagccgtgagcacggggaggaggtggagggtctcaaggcccaggtgcaagccctgaag
gaggagatggacgagcagcagcagaccttctgccagacgctactgctgtccccagaggcc
cagctggaattcggcatccagcaggagctgtcccggctgaccaatgagaacctggacctt
aaagaactggtggaaaagctggagaagaacgagaagaagctcaaaaagcaactgaagatt
tacatgaagaaagtccaggacctggaagctgcccaggcactggcccagagtgagaggagg
cgccacgagctcaccaggcaggtcaccgtgcagcggaaagagaaggacttccagggcatg
ctggagtaccacaaggaggacgaggccctgctcattcggaatctggtgacagacctgaag
ccccaggcgctggcgggcaccgtgccttgcctccctgcctacatcctctacatgtgcatc
aggcacgcggactacgtgaacgacgacctcaaggtgcactccctgctgacctccaccatc
aacggcattaagaaggtcctcaagaagcacaatgatgactttgagatgacatcattctgg
ttgtccaatacctgccgcctcctgcattgcttgaagcagtacagcggggatgagggcttc
atgactcagaatacggcgaagcagaatgagcactgtcttaagaattttgacctcactgaa
taccgccaggtgctgagcgacctttccattcagatctaccagcagctcattaaaatctcc
gagggcctgttgcagccgatgatagtgtctgccatgttggagaacgagagcattcagggt
ctgtctggggtgaagcccacgggctaccggaagcgcacctccagcctggcggatggagat
aactcctactgcctgggagccgtcatccgccagatgaattccttccacacagtcatgtgc
gaccagggcctggaccccgagatcatcctgcaggtgttcaaacagctcttctacatgatc
aacgcggtgacgctcaacaacctgcttctgaggaaggacgtctgctcctggagcacaggc
atgcagctcaggtacaatataagtcagctggaggagtggcttcggggaagaaacctgcac
cagagggaagttgctgagaccatggaacctctgatccaagcagcccagctcctgcagtta
aagaagaaaagccccgaagatgcagaggccatctgttccctgtgcaccgccctcagcacc
cagcagattgtcaaaattttgaacctttatactcccctgaacgaatttgaagaacgggta
acagtggcctttatacgaacaatccaggcacaactgcaagagcggaatgaccctcagcac
ctgctgttagacttcaagcacacgtttcccgttttgttcccatttaatccatcttctctg
accatggactcaatccacattccagcgtgtctcaatctggagttcctcaatgaagtctga
DBGET
integrated database retrieval system
