Globicephala melas (long-finned pilot whale): 115859262
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Entry
115859262 CDS
T11080
Symbol
POLI
Name
(RefSeq) DNA polymerase iota isoform X4
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
115859262 (POLI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmf03400
]
115859262 (POLI)
Enzymes [BR:
gmf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
115859262 (POLI)
DNA repair and recombination proteins [BR:
gmf03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
115859262 (POLI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
UBM
IMS_HHH_1
IMS_C
IMS_HHH
Cdd1
HHH_5
Motif
Other DBs
NCBI-GeneID:
115859262
NCBI-ProteinID:
XP_030723819
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All DBs
Position
13:10368240..10394469
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AA seq
728 aa
AA seq
DB search
MERAEMWAAGSSPGALGPEEPGGLPWFHDQVVPAGSSSSRVIVHVDLDCFYAQVEMISHP
ELKGKPLGVQQKFLVVTCNYEARELGVKKLMNVRDAKEKCPQLVLVNGEDLTRYREVSYK
VTELLEEFSPVVERLGFDENFVDLTEMVEKRLEQLQRDEPSALTVSGHVYGNQPINLHDI
LHIRLLIGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGIFKPNQQTLLLPESSQD
LIHSLNHIKKMPGIGYKTTKRLEALGISSVRDLQTFSSKILERELGISVAQRIQKLSFGE
DNSPVTPSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLNRVCQDGRKPHTIRLIIRR
YSSEKHYSRESRQCPIPSHIIQKLGIGNYDVMTPMVDVLMKLFRNMVNVKMPFHLTLLSV
CFCNLKALNTAKKGTIDYYLTPSLSTTSRSGKHSFKMKDTHMEDFSKDKETNWDFLPTGK
IESTRTGESPPDTTSFSKEKDSNELPLSSLPAGIDQEVFKQLPVDIQEEILSGKSREKVQ
GKGSLSCPLRASRGVLSFFSTKQMQDGSLNPRDHLSNTKQISSVSPCEPGTSGLNSSSSS
YVSSQKDYSHYIDSNLKDELMSQGPKESQGFHFSKTDPAVSVFHSFPNVQSEQLFSKNCT
TDSHKQPMATVLIHEGLTENREQDSTKEKITFPSDIDPEVFYELPEEVQKELLADWKRTG
SDFHTVHK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggccgagatgtgggcagcaggcagctcgccgggtgcgctggggcctgaggag
cccggcggcctcccttggttccatgatcaagtggtgccagcaggaagctcttcatctaga
gtcatagtacacgtggatctggattgcttttacgcacaagtagaaatgatctcacatcca
gaactaaagggcaaacctttaggggttcagcagaaatttttggtggttacctgcaactat
gaagctagggaacttggagttaagaaacttatgaatgtcagagatgcaaaagaaaagtgt
ccacagctagtattagttaatggagaagatttgactcgttacagagaggtgtcatataag
gttacagagttgttggaagaatttagtccagttgttgagagactcggatttgatgaaaat
tttgtggatctaacagaaatggttgagaagagactagagcagcttcaaagggatgaaccc
tcagcactgactgtgtcgggtcatgtatacggtaatcagcctataaacctgcatgacatc
ttgcacatcagactacttattggatctcagattgcagctgagatgcgggaagccatgtat
aatcagttgggtctcacaggctgtgctggagtggcttctaataaattattggcaaaatta
gtgtctggcatctttaaaccaaatcagcaaacactcttactacctgaaagttctcaagat
ctcattcatagtttgaaccacataaagaaaatgccaggtattggctataaaactaccaaa
cgtctggaagcactgggtatcagtagtgtgcgtgatcttcaaaccttttcatccaaaata
ttagaaagggaattaggaatttcagttgctcagcgtatccagaagctcagttttggagag
gataactctcctgtgaccccctcaggacctcctcagtcctttagtgaggaagattcattt
aaaaaatgttcatcagaagttgaagctaaaaataagattgaagagctacttgctagtctt
ttgaacagagtctgccaagatggaaggaagccacatacaataagattaataatccgtcgg
tattcatctgagaagcactatagccgtgagagtcgtcagtgcccaattccatcccacata
attcagaagttagggataggaaattatgatgtgatgaccccaatggttgatgtacttatg
aaactttttcgaaatatggtgaatgtgaagatgccatttcatcttacccttttaagtgtg
tgcttctgcaaccttaaagccctaaatactgctaagaaagggactattgattattattta
acaccatcattatcaacaacttcacgctctggcaagcacagttttaaaatgaaagacact
catatggaggatttttctaaagacaaggaaacaaattgggattttctaccaactggaaaa
attgaaagtacaagaactggggagtctccaccagatactacaagtttttctaaagaaaaa
gacagtaacgaacttccactctcctcacttcctgcgggtattgaccaagaggtctttaag
cagcttccagtagatattcaagaagaaatcctttctggaaaatctagagaaaaagttcaa
gggaaaggaagtttgagttgtccattacgtgcttctagaggagtattatctttcttttct
acaaaacaaatgcaagatggttccttaaatcctagggatcatttatccaataccaaacag
atatcctctgtatctccctgtgaaccaggaacatcaggtttaaatagcagtagttcctct
tatgtgtctagccaaaaggattattcacattatatagacagtaacttaaaagatgaacta
atgagtcaaggacctaaagagtctcaaggattccacttttcaaaaacagaccctgctgta
tctgttttccattcatttccaaatgtgcagagtgagcaacttttctccaaaaactgcact
acagacagccataaacaaccgatggcaacagtccttattcatgaaggacttacagaaaat
agagagcaagattctaccaaagagaaaattacttttccttctgacattgatcctgaagtt
ttctatgaactaccagaagaggtacaaaaagaactgttggctgattggaagagaacagga
tcagatttccacactgtacataaataa
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